LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1872g00012	ATGTTGCGAATATCAATTTTCTTCCTCCTGATATCCCATGCCTTTTCCATGAACTTCAGCTTCACCAGTTTCCAGCCCAATGATTATAGCAAGATATCGTGTGAGTTATCAGCTTACATTGCAGAGTCATACCTCTACTTAGTAAGAAACCAAAAGGAGCTATCCTCAGACAATAGTCAAGGTCGAGCCACATATCAAGAACCGATGCACTTGTGGGACAAAGCCACCGGGAAACTCGTAAATTTCAACACCAATTTCACCTTCGTGATTGATTCACAGAACAGGAGTAATGTTGGAGATGGGATGGCCTTCTTCTTAGCCCCTAATGGCTCAAAGCTTCCTAATCCCCCAAAAGTTGGAGGAGGTTCTATGGGTCTGATTATTGGAGGCCAAGAAACGATACTTAATTCAACAGATCATCCCTTTGTTGCTGTGGAGTTTGATATCTATCCCAATTGGGGTCCTACTGAAGGCTGGGATCCTCCGTATGTACATGTGGGTGTCCATATCAATTCTATTAGATCTAACAGAAGTGTTCGATGGCTGGCTAATATCACAGGAGGCAGATCAAATCAGGCTTTCATCAGCTACAATGCAAGTACACGTAATTTAAGTGTCTCCTTCACCGGTTTTGATCAATTTAACAACACTGTGTGGCAACATCTTCATCAAATAGTTGATCTAAGAAAGTACTTGCCTCAATGGGTTAGTTTCGGTTTCTCAGCAGCCACAGGAACATCAGTTGCAATACACAAGGTCGATACATGGAGTTTCTACTCAGAGGACTTCCCACGTATTGCTCCCAGTACAGGTAGAAATGCCACAGCACTTGCTATAGGATTAGGGGTTGGAGGGATTGCTTTAGTTTGTCTGGTTGTATTGTTTTTCTTGTGGAAGTACAAAAAGAAAACAGAAGATGGTGAGTCTAATGACAACATCAGTGACGATGATTTTGAAGGAGGAACAGGGCCCAAAAAGTACTCATATGCCGAATTGGCAAGTGCCGCAGATAATTTCAAAGATGAGCAAAAGCTTGGTCAGGGAGGATTTGGAGGGGTCTATAGAGGTTTTCTCAAAGATTCAAACTCCTACGTTGCCATAAAGAGAATTTCAAAGGATTCTAAACAAGGGAAGAAGGAGTTTGCTTCAGAAGTAAGAACTATTAGTCAACTAAGACATCGAAACTTGGTGCAACTAATCGGTTGGTGTCATGAAAGGAAAGAGCTCTTGCTAGTTTACGAGTACATGCCAAATGGAAGTTTGGCTTCTCATCTCTTTGGTGACAAAAGGTTTCTCACATGGTCAATTAGATTTAAAATTGCTCAAGGCTTGGCCTCTGCCTTATTATACCTGCATGAAGAATGGGAACAATGTGTGGTTCATAGAGACATAAAATCAAGCAACGTCATGCTAGACTCCAACTTCAATGCAAAACTTGGAGATTTCGGATTAGCACGACTTGTAGACCATGCAAAAGGAGCACAAACTACAGCTTTAGCAGGAACTATGGGTTACATGGCTCCTGAATGTATCACTACTGGAAGGGCCAGTAAAGAATCTGATGTATATAGTTTTGGAGTTGTTGCTCTAGAGTTAGTTTGTGGAAGAAAACCTATCAACCATAGGGTTCCAGAAGACGAAATAAACATAGTGAATTGGGTGTGGGATCTCTATGGAAGGGGGAGAATTCTTGAAGCAGTTGATCCAAGGCTACAAGGAGATTTTGACCACAGTCAAGTGGAATGCCTGATGATTGTCGGGCTGTGGTGTGCTCATCCTGATCATAACCATAGACCTTCAATAAGGCAAGCAATTCATGTGCTTAACTTTGAAACTCCATTTCCTAGTCTTCCTTCAAGCTATCCCATACTAACTTATCATGAATTCCCAATGTCATTTTCAATTCTATCGAGCTCCAGTGCTTCATATGCAAGTCAAAACCAGAATATAAGCTTTAGTTCCAACACAAATTCCTCTGGATTCACTGCTTCAACTTCTCGCGGTAATGTTTCACCAAGTGTGTCACTTTTGTACTCGAGCAAAAATTGA	2049	0.4153	MLRISIFFLLISHAFSMNFSFTSFQPNDYSKISCELSAYIAESYLYLVRNQKELSSDNSQGRATYQEPMHLWDKATGKLVNFNTNFTFVIDSQNRSNVGDGMAFFLAPNGSKLPNPPKVGGGSMGLIIGGQETILNSTDHPFVAVEFDIYPNWGPTEGWDPPYVHVGVHINSIRSNRSVRWLANITGGRSNQAFISYNASTRNLSVSFTGFDQFNNTVWQHLHQIVDLRKYLPQWVSFGFSAATGTSVAIHKVDTWSFYSEDFPRIAPSTGRNATALAIGLGVGGIALVCLVVLFFLWKYKKKTEDGESNDNISDDDFEGGTGPKKYSYAELASAADNFKDEQKLGQGGFGGVYRGFLKDSNSYVAIKRISKDSKQGKKEFASEVRTISQLRHRNLVQLIGWCHERKELLLVYEYMPNGSLASHLFGDKRFLTWSIRFKIAQGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNAKLGDFGLARLVDHAKGAQTTALAGTMGYMAPECITTGRASKESDVYSFGVVALELVCGRKPINHRVPEDEINIVNWVWDLYGRGRILEAVDPRLQGDFDHSQVECLMIVGLWCAHPDHNHRPSIRQAIHVLNFETPFPSLPSSYPILTYHEFPMSFSILSSSSASYASQNQNISFSSNTNSSGFTASTSRGNVSPSVSLLYSSKN	682

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1872g00012	682	Pfam	Protein kinase domain	339	606	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1872g00012	682	ProSitePatterns	Protein kinases ATP-binding region signature.	345	368	IPR017441	GO:0005524
	Pral1872g00012	682	FunFam	Lectin-domain containing receptor kinase A4.3	416	628	-	-
	Pral1872g00012	682	PANTHER	-	48	612	-	-
	Pral1872g00012	682	MobiDBLite	consensus disorder prediction	661	682	-	-
	Pral1872g00012	682	FunFam	L-type lectin-domain containing receptor kinase IX.1	324	415	-	-
	Pral1872g00012	682	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	459	471	IPR008271	GO:0004672\|GO:0006468
	Pral1872g00012	682	SMART	serkin_6	339	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1872g00012	682	SUPERFAMILY	Concanavalin A-like lectins/glucanases	14	261	IPR013320	-
	Pral1872g00012	682	Gene3D	-	15	264	-	-
	Pral1872g00012	682	CDD	STKc_IRAK	345	609	-	-
	Pral1872g00012	682	Gene3D	Phosphorylase Kinase; domain 1	324	415	-	-
	Pral1872g00012	682	SUPERFAMILY	Protein kinase-like (PK-like)	323	633	IPR011009	-
	Pral1872g00012	682	Gene3D	Transferase(Phosphotransferase) domain 1	416	629	-	-
	Pral1872g00012	682	ProSiteProfiles	Protein kinase domain profile.	339	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1872g00012	682	ProSitePatterns	Legume lectins alpha-chain signature.	232	241	IPR000985	-
	Pral1872g00012	682	Pfam	Legume lectin domain	17	264	IPR001220	GO:0030246
	Pral1872g00012	682	CDD	lectin_legume_LecRK_Arcelin_ConA	18	260	IPR001220	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1872g00012	Pral-Chr1872	86603	88676	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1872g00012	7	627	Receptor kinase-like Gene Family	AT5G10530	48.657	0.0	566

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral1872g00012		Pkinase	4.3e-54	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1872g00012	-		-	pcin:129286332	945.651