LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1872g00006	ATGGCAGCTAGCCAATACATTAACAATCCTCCTCCCAATTATCTTCCTTGTTTGGAACTCATTACCACCATAACCCTGTTATTCTTTCTCACATACCCTTCTGTTTCTTCACTTTCCTTCAACTATGAACAATTCAAGAACAGTGATCCAACATTGGAACTTAAAGGAGATGTTCACTGGGAAAGTGGATGCCTGAACCTCACTAAGTTAGAGAAAGACAGCGTTGGGAGAGTCACCTCCGGCGGAAATCTCCATCTTTGGGATGAGATGACAACAAGGGATGAGATGACAAGAAAAGTCACAGATTTTTCCTCCCATTTCTCCTTCATCATCAATACACAAGGCAAGACCACCAATCTTGGAGATGGCATAACCTTCTTCCTTGCCGCACCAGGCTTTCCCCTTCCTGATCCTAGAGATGGAGCCGGAATTGGCCTCGTGAGTCGTCTGCAATTGAAAGATCCAAATTACAGAAAGCAGCATCCTTTTGTGGCTGTGGAGTTTGACACCTTCCCAAATCTCGATTTGGATCCTCCTTATGATCATGTGGGGATTGATATTAATTCTCTGAACCCAAGTTATACTAAAAAGTGGTTCACTGTCAAGGATGGAAGAAAATATGATGCCATGATCAAGTACAATTCAAGTTCTTTCAATTTGAGTGTAAGTTTTATTGGGTATGAGAATGGGTCCAGAATTGAACAGAATTTCTTTCATATTGTCAACTTGGCTTATGTTCTTCCAGAGTGGGTTGAGTTTGGATTCTCTTCTGCAACAGGTTATTTACATGATGAGATCCATACTCTTTGCTCTTGGTCCTTCAGTTCAAGGTTAGACATGGCAGATCAGAACAATCAGAGCAAGATAGGACTTATAGAAGCATTGAGCATAGGAGGAGGTGTTTTAATTTGTGGAATGGGGTTATTTTGGTTTATGATTTGGAGAAGACGAAGAGGAAGAAGAATTGGTGCTTTTGGCTTTGAGCTAATAAGAATGGAAGATGAGTTCCAGAGAATGATAGGGCCGAATAAGTTTCCATATAATCAGCTTGTTAAAGCAACAGACAACTTTACACAAGAGAATAAGCTTGGAGAGGGAGGATTCGGTGGCGTTTACAAAGGGTTCATAGAAGAATTGAATAGCTATGCTGCTATTAAAAGGATATCACAAGGATCTAAGCAAGGGGTGAAGGAGTATGCATCAGAGGTCAAGATCATCAGCCAACTGAGGCATAAGAATCTGGTTCGACTGATCGGTTGGTGCCATGAGCACAATGACTTAATGCTGGTTTACGAGTTCATGCAAAACGGAAGCTTAGATTCTCATCTCTTCAAAGGCAAAAGTCTCTTGACATGGGAACAAAGATACAACATAGCTCAAGGCCTGGCCTTAGCATTATATTACCTCCATGAAGAGTGTGAACAATGTGTGGTTCATAGGGACATAAAAGCAAGCAATGTTATGTTAGATCCAAAATTCAACGCAAAACTCGGAGATTTTGGGTTGGCTAGACTGGTGGACCATGCAAAAGGGTATAAAACAACAGATCTAGCGGGAACCTTTGGATATATGGCTCCCGAATACATCTCAAAAGGAAAGGCCAGTAGAGAGACTGATGTGTATGGTTTTGGAGTCGTCGCTTTGGAAATTGCTTGCGGGAGAAAAGCAATCCAATTTAGTGCCAATGAAGAACGGGTTTTACTTGTGGATTGGACTTGGGAACTCCATGGCAGAGAAAGTGTTCTTGAAGCAGCTGATCAGAGATTGTGTGGAGACTTCAATGAGCAGGAAATGCAGAGGTTGATGATGGTGGGATTATGGTGTGCTCATCCGGATCATATTCAAAGGCCTCCTATGAGACAAGTAGTTCAGGTGCTTAATTTTGAAGCTCCTTTACCCAATCTGCCATCCCAGAAGCCTGCACTTCCAAATGATTCTGTTGGAATCAGTGACTTTATATCTTCAAACTCTTCGTCAAGTGCTAGTGCTTCGAGGATCAATCGTACCTTCCCTTTAAGTGATGGCTTTTTCACTGGCTCATCACAGTCAAGCATTTCTCCAGCAGACCCCATTCTGCACACACACTAA	2088	0.421	MAASQYINNPPPNYLPCLELITTITLLFFLTYPSVSSLSFNYEQFKNSDPTLELKGDVHWESGCLNLTKLEKDSVGRVTSGGNLHLWDEMTTRDEMTRKVTDFSSHFSFIINTQGKTTNLGDGITFFLAAPGFPLPDPRDGAGIGLVSRLQLKDPNYRKQHPFVAVEFDTFPNLDLDPPYDHVGIDINSLNPSYTKKWFTVKDGRKYDAMIKYNSSSFNLSVSFIGYENGSRIEQNFFHIVNLAYVLPEWVEFGFSSATGYLHDEIHTLCSWSFSSRLDMADQNNQSKIGLIEALSIGGGVLICGMGLFWFMIWRRRRGRRIGAFGFELIRMEDEFQRMIGPNKFPYNQLVKATDNFTQENKLGEGGFGGVYKGFIEELNSYAAIKRISQGSKQGVKEYASEVKIISQLRHKNLVRLIGWCHEHNDLMLVYEFMQNGSLDSHLFKGKSLLTWEQRYNIAQGLALALYYLHEECEQCVVHRDIKASNVMLDPKFNAKLGDFGLARLVDHAKGYKTTDLAGTFGYMAPEYISKGKASRETDVYGFGVVALEIACGRKAIQFSANEERVLLVDWTWELHGRESVLEAADQRLCGDFNEQEMQRLMMVGLWCAHPDHIQRPPMRQVVQVLNFEAPLPNLPSQKPALPNDSVGISDFISSNSSSSASASRINRTFPLSDGFFTGSSQSSISPADPILHTH	695

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1872g00006	695	Gene3D	-	35	298	-	-
	Pral1872g00006	695	PANTHER	-	63	633	-	-
	Pral1872g00006	695	ProSitePatterns	Legume lectins beta-chain signature.	164	170	IPR019825	-
	Pral1872g00006	695	Pfam	Legume lectin domain	37	288	IPR001220	GO:0030246
	Pral1872g00006	695	CDD	STKc_IRAK	363	627	-	-
	Pral1872g00006	695	ProSiteProfiles	Protein kinase domain profile.	357	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1872g00006	695	Pfam	Protein kinase domain	357	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1872g00006	695	CDD	lectin_legume_LecRK_Arcelin_ConA	38	278	IPR001220	GO:0030246
	Pral1872g00006	695	SUPERFAMILY	Protein kinase-like (PK-like)	335	628	IPR011009	-
	Pral1872g00006	695	ProSitePatterns	Legume lectins alpha-chain signature.	247	256	IPR000985	-
	Pral1872g00006	695	FunFam	L-type lectin-domain containing receptor kinase IX.1	342	433	-	-
	Pral1872g00006	695	Gene3D	Phosphorylase Kinase; domain 1	342	433	-	-
	Pral1872g00006	695	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468
	Pral1872g00006	695	ProSitePatterns	Protein kinases ATP-binding region signature.	363	386	IPR017441	GO:0005524
	Pral1872g00006	695	FunFam	Lectin-domain containing receptor kinase A4.3	434	644	-	-
	Pral1872g00006	695	Gene3D	Transferase(Phosphotransferase) domain 1	434	645	-	-
	Pral1872g00006	695	SMART	serkin_6	357	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1872g00006	695	SUPERFAMILY	Concanavalin A-like lectins/glucanases	36	282	IPR013320	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1872g00006	Pral-Chr1872	24914	27083	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1872g00006	28	641	Receptor kinase-like Gene Family	AT5G10530	44.640	7.02e-166	489

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral1872g00006		Pkinase	6.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1872g00006	-		-	cam:101491058	720.694