Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1871g00019 ATGGAGATTGCTTCGTCCATTGTTGCAAAAGTTGCAGAGCCGATAGTAGACTACACCGTGGCACCCATTGCAAGGCAAGTGGGTTATTTGATTTTCTACGAAGACAATTTCAAGAATCTCAAGGATCAAGCTGCGGAGCTGAAGAGAGCAAAGGACACTATTTGCGATAGAGTGGAAGCAGAAAGAAAAAGTGCACGGCAAATTTGTGATGGTGCACAGAACTGGTTGAACAAAGCGGATAAAATTATAGAAGCGGTAGAGAAACTTGGTAATGATCCTCGTCATAAGAATGCTGGTTGCCGCAGGTGGCCTTTTCCTGATTTGAAGTCACGACATCAACTCAGTAGAAAAGCAAAGAAGATGGTCGGAGACGTTGCTGAAGTAATGCAGGGAAAAGATAACATTGGTCCACTTACATTCTTGCCTGGTCTAGAGGGAGTAGGCTCCACTTCTGTTACAAACAGCGAAAAGCTTGGCTCAAGAAAGAAAGAGAAAGAGGAAATTATATTGGCCCTAAAAGACCCAAACTTAAGTCGGATTGGGGTCTATGGGCTTGGCGGAGTGGGGAAAACCACTCTAGTTGAAGAAATTGCTAGGCAGGTTAAAGATCACAAGTTGTTTGATGAAGTTGTTATGGTTAATATATCCCAAACTGCAGAACTTGAAAGAATTCAACGTGAAATGGCAGATCTTTTGCGTCTTCGGTTTGAGGAGACGAGCATACCTGGAAGAGCATTACGCCTCAGGCAAAGGCTTAAAAATGAGAAAAGTATCCTCGTCATATTGGACGATATTTGGGATGTACTCAAATTAGAAAAGCTTGGAATTCCTTTGAATGATCATAAGGGTTGCAAACTATTGTTGACTTCTAGAAATCAAGAAATATTACAGAAAATGGAAACTCAAAAAGATTTCTTGATAGATGTTTTAAATGAAGATGAAGCTTGGAGATTGTTTGAAGATATGGTGGGCGATGTTGTTAAAGATGTTAGTTTGCATGATGTGGCAATCCAAGTAGCTCAAAAATGTGCAGGATTGGTTGTTCTTATAGTGACAGTGGCAAGAGCATTAAAAGGTAAAGATGATATTGATTCTTGGAAAGATGCCTTAAACCAGCTAAAGACTATTGATAAGGAAGGGGTGAATGAGAAAATCTATTCGGCTTTGGAGTTTAGCTACAATCATCTTGAAGGTGATGATGTGAAGGCACTTTTCTTACTTTGTGGATTATTAGGTCCACAAATTTGTGTCGATGACTTGTTGACATATGGTATGGGTTTGGGCATATTCAAGCAAATTTATACTCTAAATGATATAAGACGTCAACTTCATAGGTTAATTGGTTCCTTAAAAGGCATCCTGTCTATTGCTTGA 1374 0.3967 MEIASSIVAKVAEPIVDYTVAPIARQVGYLIFYEDNFKNLKDQAAELKRAKDTICDRVEAERKSARQICDGAQNWLNKADKIIEAVEKLGNDPRHKNAGCRRWPFPDLKSRHQLSRKAKKMVGDVAEVMQGKDNIGPLTFLPGLEGVGSTSVTNSEKLGSRKKEKEEIILALKDPNLSRIGVYGLGGVGKTTLVEEIARQVKDHKLFDEVVMVNISQTAELERIQREMADLLRLRFEETSIPGRALRLRQRLKNEKSILVILDDIWDVLKLEKLGIPLNDHKGCKLLLTSRNQEILQKMETQKDFLIDVLNEDEAWRLFEDMVGDVVKDVSLHDVAIQVAQKCAGLVVLIVTVARALKGKDDIDSWKDALNQLKTIDKEGVNEKIYSALEFSYNHLEGDDVKALFLLCGLLGPQICVDDLLTYGMGLGIFKQIYTLNDIRRQLHRLIGSLKGILSIA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1871g00019 457 Gene3D - 309 397 IPR042197 -
Pral1871g00019 457 SMART AAA_5 176 313 IPR003593 GO:0016887
Pral1871g00019 457 Coils Coil 30 57 - -
Pral1871g00019 457 Coils Coil 214 234 - -
Pral1871g00019 457 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Pral1871g00019 457 PRINTS Disease resistance protein signature 179 194 - -
Pral1871g00019 457 PRINTS Disease resistance protein signature 252 266 - -
Pral1871g00019 457 PRINTS Disease resistance protein signature 343 357 - -
Pral1871g00019 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 408 IPR027417 -
Pral1871g00019 457 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 23 451 - -
Pral1871g00019 457 Gene3D - 111 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1871g00019 Pral-Chr1871 423745 425118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1871g00019 180 447 WRKY Transcription Factor Family AT5G45050 27.241 6.60e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1871g00019 - - pcin:129288189 607.446