Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1868g00012 ATGGAGTCATCCTCTGGGGTTCATTTTTCTGGACTTCACATGAATGGTTCAGCACAGAGGAACGTTGACGCAGAGCAACCTACAACTTCAGCTGCTGACATGTATAAACAACCTTTCGTTATAGGTGTTGCTGGGGGAGCTGCATCGGGGAAGACTACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAACGAGTTGTACTTGTTACTCAGGATTCTTTTTATCATAATTTGACTGAAGAGGAACTTACAAGAGTCCAAGATTACAACTTTGACCATCCTGATGCTTTTGACACTGAGAAGCTATTATGGGTTATGGACAAGTTAAGGCATGGACAAGCCGTAGATATTCCGAACTATGACTCAAAGAGTTACAAGAGCGATGTGTTTCCAGCAAGAAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGCTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCCAGGAGAATTAGGCGTGATACCTGTGAGAAGGCTCGGGATATTGGCTTAGTGCTTGATCAGTATTCTAAATTTGTAAAGCCGGCTTTTGATGACTTTATTCTCCCAACAAAGAAATATGCTGATATCATTATACCCCGTGGAGGAGACAATCATGTGGCCATTGATTTAATCGTACAGCATATCCGGACAAAGCTTGGTCAGCACGATTTGTGTAAAATATATCCTAATTTATATGTCATTCAAACAACTTTTCAGATACGGGGTATGCACACCCTGATACGTGATTCTCAGACAACAAAGCATGATTTTGTGTTTTATGCTGACCGTTTGATTCGTTTGGTTGTTGAGCATGGCCTGGGGCATCTTCCATTTACGGAAAAGCAAGTAATAACTCCAACTGAGTCTGTATATACTGGTGTGGATTTTTGCAAGAGGTTATGTGGTGTCTCCGTTATCAGGAGTGGAGAGAGTATGGAAAATGCTTTACGTGCTTGCTGTAAAGGTATCAAGATTGGTAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGTTAATATATGAGAAGTTGCCGAACGATATCTCAGATAGACATGTGTTGCTGTTGGATCCTATCCTGGGAACCGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTCTCAGAAAGGGTGTACCGGAGTCCAACATTATATTTCTCAACCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAGAAGTTTCCCAGAATAAAAATTGTGACATCCGAGATTGATTTTGGTTTGAATGAAGATTTTCGTGTTGTACCTGGCATGGGTGAGTTTGGGGACCGTTATTTTGGAACAGATGATGATGATGACCAACAAGTGGTGGCCCCTTCACAAGATTGA 1416 0.4117 MESSSGVHFSGLHMNGSAQRNVDAEQPTTSAADMYKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVTQDSFYHNLTEEELTRVQDYNFDHPDAFDTEKLLWVMDKLRHGQAVDIPNYDSKSYKSDVFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTCEKARDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTESVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPQGVHVVCKKFPRIKIVTSEIDFGLNEDFRVVPGMGEFGDRYFGTDDDDDQQVVAPSQD 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1868g00012 471 CDD UMPK 40 238 IPR000764 -
Pral1868g00012 471 Gene3D - 34 241 IPR027417 -
Pral1868g00012 471 MobiDBLite consensus disorder prediction 1 27 - -
Pral1868g00012 471 NCBIfam uridine kinase 37 238 IPR000764 -
Pral1868g00012 471 PANTHER URIDINE KINASE 29 367 - -
Pral1868g00012 471 FunFam Uridine kinase 242 457 - -
Pral1868g00012 471 Pfam Phosphoribulokinase / Uridine kinase family 40 226 IPR006083 GO:0005524|GO:0016301
Pral1868g00012 471 CDD PRTases_typeI 315 430 IPR000836 -
Pral1868g00012 471 SUPERFAMILY PRTase-like 241 458 IPR029057 -
Pral1868g00012 471 PRINTS Uridine kinase signature 184 195 - -
Pral1868g00012 471 PRINTS Uridine kinase signature 113 128 - -
Pral1868g00012 471 PRINTS Uridine kinase signature 68 79 - -
Pral1868g00012 471 PRINTS Uridine kinase signature 170 180 - -
Pral1868g00012 471 PRINTS Uridine kinase signature 38 55 - -
Pral1868g00012 471 PRINTS Uridine kinase signature 206 219 - -
Pral1868g00012 471 FunFam Uridine kinase 35 241 - -
Pral1868g00012 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 231 IPR027417 -
Pral1868g00012 471 Gene3D - 242 457 IPR029057 -
Pral1868g00012 471 Pfam Uracil phosphoribosyltransferase 256 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1868g00012 Pral-Chr1868 66347 73037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1868g00012 1 460 PRT Gene Family AT4G26510 85.714 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1868g00012 K00876 - zju:107407445 840.106