Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1868g00009 ATGGCAGAAACGGCGGTGAACCTTCTGATCGACAAGTTGATAGCTTTAACGAGAAAGGAAGCAGGGCTACTGAAAGGTGTGGAGAAGCAAATTGAGCAGATCAAAGATGAGTTGGAACTGATCAGAGCTTACATAAAAGATGCAGATCACAAAGCAGATATAGCAGAGACGAGCAATTACTTGGTGAAAGAGTGGGTGAGACAAATGAGAGAAGTTGCATATCGTATGCAAGATGTGATGGACGAATACTTGTTTAAGGTGGAAATGCGCCGGCAAGAACGGCGGCGGGGACTGGTGGGTGTAGCTCGTAGAATCTGTCACTTGCTAAGGAGTATAATACCTCGTCATGAGATAGCAAGTGAGATTATGGACATTAGAGAATCCATGGCGAAACTGAATGAAAAAAGACAGTTTTTCGGGTTTTATTCTTCACTTCCACAACCCAGCAATCGTGTTGCAGAGAACTCCTCATCATCAAGGCGTTACCTCCGATTGGCTGCTCGTTTCATGGATGATTCTCATCTTGTCGGCTTTGACCACACTAGGAAACTTCTCAGCCATTGGCTATCAGATAAAGATTCTAGGCGCACCGTAATCTCTGTGGTGGGCGAAGGCGGACTAGGTAAAACAACTATTGCGAGCAATTTATACGAGCAAAAGAGAGAGGAAAGATGTTTTGATTGTTATGCTTGGATCAGTGTCTCGGGCTCACTCAGTGGAGAAAAGCTGTTAAAATCTATGATACAAAGCTTTTATGAGTATGATGGTGGCAACGAAAATGCTGCCCAGGCCATTAATGAAATCATGGACGGTTGTGCATTGACAAGTAAACTTAGAGAATACTTGCAGGATAAAAGGTATATGATTGTTTTGGATGATATAAGAGACAAAGAATTTTGGAAAAGTGTTGAATTCGCGTTACCAGATAACAACAAAAGCAGCCGGATAATGATTTCTACAAGGGACGAGGGTGTTGCAGATTTTTGTAGAAGTTATGCTCCAGTCCACATTCACAAGCTGGATCCGCTACCTGAAGAAGATGCTTTGAAGCTCTTCCATCTAAAGGTCTTTCAGTTTGATGATTTAAAAGGGTGTCCTGAAAATTTGTTAGAAATATCTCGAGACTTTGTCAACAAGTGTGATAGAGTGCCACTTGCAATTGTGGCTATAGCTGGTCTCTTATCAACTAAAAAGAAAGCTACTTATGAATGGGAGAGTGTTCTTAAAAGTCTTCGATCAAAATTGGCAAGTGATCCCCATTTGAAAGGTTATTATCAGGTTTTATCAGAGAGTTATAAGGATCTCGATTACCACCTCAAGTTATGCCTCTTGTATTTTGGCATCTTCCCTGAAGGCTACTCCATTAGCTGCTCGAGACTCGTTAATTTGTGGATAGCTGAGGGTTTTGTAAAGAAAAATGAAAATGAAGATCACACAACACTTGAGGAAGCAGGTGAAGAATACTTGAGCGAACTGATACGAAGGAACTTGGTTAAGATATCGACAGAGTATCCTTATAGCAAGGTTCGAAGATGTCGAGTCCATGATTTGATGCATGGCTTCATTCTTAAAACTTGTGAGGAGATCAACTTTTGTCAAGTGAAGAATAGTGAGGTTTTTGGCTTGCATCGATGGACCAGGCGCCTGTCAATCCAAATGGACGCTATGGATGCTTTGGAAGCCACAACAAATTATGAAAGAGTGCGGTCCAATTTTGTGTTTAAACAGTTACCTAAGCCTGTGATTGAGTCATTCCTGTCAGGTTTCAAGTTGTTAATAATATTAGATTTGGAGAATGCACCCATTGATGATCTTCCTAGAGCAGTTAGGAACTTAGTGCATTTGAAATATCTGAGCCTTAGAGGTACAAAAATCAAGTCCATTCCCAAGTTCATTGGGAAGCTTCAAAATCTAGAGTCACTGGACTTGAAACACAGTCTAGTTGGTGAATTGCCTGAAGAGATTAACAAGCTTGTCAAGCTGCGTCGTCTACTAGCATATTATTTTCCTCAGCAGAGCCATACTATTGCTAGTTTACATGGAGTGAGTCTAAAGGAAGGGATTGGGTGTTTAAAGGCTCTTGAGAAGCTGGCGATGATTGATGTAACAGATGGAGATGCTTTAATCTGTGAATTGAAGAGTTTGAAGCTCATGAGAAATTTGTCCATCAAAGGGCTTCAAACACGCCAAGGGCAGCTATTATGTGGCTCCATAGAGAGCATGAGCCATCTCTGTGCACTATGTATTGTAGCAATACAAGAACATGAAGTTATTGATTTGGAATCAATAAATGATCCTCCTTTGAATTTGCAGCGCCTCTACCTAAGCGTTCGCATGGAGAAACTTCCAACATGGATTGTTAAACTCAAGAATCTTGTGAGGTTAAGATTGGAATGGTCAGGACTAAATGAAGATCCTCTCTCAGTTCTGAAGGACTTGCCGGAATTGTTGGAACTTCAGCTTTGGAAATCGTTCGAAGGTGAAGAGCTTCATTTCAAAGACGGATGGTTTAGAAAGCTGAAGAGTTTGGATGTGCTGGAGATGCAAGACTTGAAGACTTTGAGAATAGACAAAGCAGCGTTGCCCATCCTTGAAACTCTGCAATTGGTTAGCTGTCCCCAGTTGGCGGAGATGCCCACAGGCATTCAGAATTTGGAGAACCTCAAACTGCTTTACCTCGTTGATATGTCTGATCAAATGATAACTGATCTCAAGTCGAAGGAAGAAAGAAGCTACGACAAAATCAAGGAAATAACCATCGTGACTTCCTTTTCAAAGGGCTTTTATCGTCGGAAACTTGAACAAATTTGA 2811 0.413 MAETAVNLLIDKLIALTRKEAGLLKGVEKQIEQIKDELELIRAYIKDADHKADIAETSNYLVKEWVRQMREVAYRMQDVMDEYLFKVEMRRQERRRGLVGVARRICHLLRSIIPRHEIASEIMDIRESMAKLNEKRQFFGFYSSLPQPSNRVAENSSSSRRYLRLAARFMDDSHLVGFDHTRKLLSHWLSDKDSRRTVISVVGEGGLGKTTIASNLYEQKREERCFDCYAWISVSGSLSGEKLLKSMIQSFYEYDGGNENAAQAINEIMDGCALTSKLREYLQDKRYMIVLDDIRDKEFWKSVEFALPDNNKSSRIMISTRDEGVADFCRSYAPVHIHKLDPLPEEDALKLFHLKVFQFDDLKGCPENLLEISRDFVNKCDRVPLAIVAIAGLLSTKKKATYEWESVLKSLRSKLASDPHLKGYYQVLSESYKDLDYHLKLCLLYFGIFPEGYSISCSRLVNLWIAEGFVKKNENEDHTTLEEAGEEYLSELIRRNLVKISTEYPYSKVRRCRVHDLMHGFILKTCEEINFCQVKNSEVFGLHRWTRRLSIQMDAMDALEATTNYERVRSNFVFKQLPKPVIESFLSGFKLLIILDLENAPIDDLPRAVRNLVHLKYLSLRGTKIKSIPKFIGKLQNLESLDLKHSLVGELPEEINKLVKLRRLLAYYFPQQSHTIASLHGVSLKEGIGCLKALEKLAMIDVTDGDALICELKSLKLMRNLSIKGLQTRQGQLLCGSIESMSHLCALCIVAIQEHEVIDLESINDPPLNLQRLYLSVRMEKLPTWIVKLKNLVRLRLEWSGLNEDPLSVLKDLPELLELQLWKSFEGEELHFKDGWFRKLKSLDVLEMQDLKTLRIDKAALPILETLQLVSCPQLAEMPTGIQNLENLKLLYLVDMSDQMITDLKSKEERSYDKIKEITIVTSFSKGFYRRKLEQI 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1868g00009 936 PANTHER DISEASE RESISTANCE PROTEIN RP 32 872 IPR044974 GO:0006952
Pral1868g00009 936 Gene3D - 4 119 - -
Pral1868g00009 936 Gene3D - 158 333 IPR027417 -
Pral1868g00009 936 CDD RX-CC_like 2 134 IPR038005 -
Pral1868g00009 936 FunFam Probable disease resistance protein At1g61300 158 333 - -
Pral1868g00009 936 Pfam Rx N-terminal domain 5 95 IPR041118 -
Pral1868g00009 936 SUPERFAMILY L domain-like 513 897 - -
Pral1868g00009 936 Coils Coil 24 44 - -
Pral1868g00009 936 Gene3D - 438 525 IPR036388 -
Pral1868g00009 936 Pfam NB-ARC domain 185 433 IPR002182 GO:0043531
Pral1868g00009 936 PRINTS Disease resistance protein signature 838 854 - -
Pral1868g00009 936 PRINTS Disease resistance protein signature 281 295 - -
Pral1868g00009 936 PRINTS Disease resistance protein signature 380 394 - -
Pral1868g00009 936 PRINTS Disease resistance protein signature 198 213 - -
Pral1868g00009 936 FunFam Probable disease resistance protein At1g63360 432 524 - -
Pral1868g00009 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 446 IPR027417 -
Pral1868g00009 936 Gene3D - 343 436 IPR042197 -
Pral1868g00009 936 Gene3D Ribonuclease Inhibitor 590 913 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1868g00009 Pral-Chr1868 48685 53516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1868g00009 199 904 WRKY Transcription Factor Family AT5G45050 24.377 1.44e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1868g00009 K13457 - cave:132169539 718.383