Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1868g00002 ATGAGTGATTCTGCCTACAGAGTCGAAACCACTTCGCGCCTCGCCCAATGGAGAATCGAAAACCCTGCTTCCTGCACTTACCGCAAATCTGATCCTTTCAGGATCGGCAAGTGGAATTGGCATTTGGCCGTGGAGAAGAACCGGGTTTTATTTGTAAAATTATATCCCGAAATATCGAATCTAACCAGAGACAACCCCCCGATTGCATCTTTTATCATTCGGGTCGTTAGTTCTGCTGGGGATCGCAAGGCCTTGACCCATCCAGTAGTAAAAGACAAATTGATCAAGAATAGCGAAGACTTTGTTTGGGCACTTGAGGTTCCAGTAACTGGGAAATTCATTATTGACGTCGAGTTCCTTGATTTGAAGACTGCATCCCCAAACGGTGGAGAACCTTGCTCCATCTGGGCGGAAGGACTTACACCAAAGGCATCTAATGCAACAGCTCTTGAAGCTCTTAGTCGGATGCTAATTGAAGGGATCCACACAGACATAGTGATCAATGCATCTGATGGAAGCATTGGAGCTCATCGCGCTGTTCTTGCTGCTCGATCTCCTGTCTTTCGCAGCATGTTTTCACATGACCTTAAGGAGAAGGAGCTATCAACAATAAACATTGAAGACATGTCCATTGATGCTTGCCAGGCATTCCTCAAATATCTTTATGGTAGCATAGGAACTGAAGAATTTCTCACACACAGGCTTGTCCTTCTTCATGCTGCTGACAAGTATGACATATCTGACCTGAAAGAGGCATGCCATGAAAGCCTTGTAGAAGACATTGATACCAGAAATGTTCTTGAGAGGCTTCAAAACGCATCCCTGTACCAATTACCAAAACTGAAGAGTAGCTGCTTACGGTATCTTGTAAAATTTGGGAAAATATTCGACATCCGGGATGATTTCAACTCCTTCCTGCAGGGTGCAGATAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTCTCAATGCCTGGAGAGGGTTCTGA 987 0.4488 MSDSAYRVETTSRLAQWRIENPASCTYRKSDPFRIGKWNWHLAVEKNRVLFVKLYPEISNLTRDNPPIASFIIRVVSSAGDRKALTHPVVKDKLIKNSEDFVWALEVPVTGKFIIDVEFLDLKTASPNGGEPCSIWAEGLTPKASNATALEALSRMLIEGIHTDIVINASDGSIGAHRAVLAARSPVFRSMFSHDLKEKELSTINIEDMSIDACQAFLKYLYGSIGTEEFLTHRLVLLHAADKYDISDLKEACHESLVEDIDTRNVLERLQNASLYQLPKLKSSCLRYLVKFGKIFDIRDDFNSFLQGADRDLIAEVFHEVLNAWRGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1868g00002 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Pral1868g00002 328 Pfam BTB/POZ domain 159 259 IPR000210 GO:0005515
Pral1868g00002 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Pral1868g00002 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Pral1868g00002 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Pral1868g00002 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Pral1868g00002 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1868g00002 Pral-Chr1868 4695 7100 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral1868g00002 BTB 7.8e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1868g00002 K10523 - gmx:100790186 575.859