Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1866g00006 ATGGTGATCGAGGAAGATGTTGAGAGCTGCGCGAGTCGAGCCGTGCAGTCACAGAAAGCTCATCCCCGTCATCACAGCCAGAAATTGGAGGTGTACAATGAGGTGCTCCGTCGAATTCAAGAGTCCAATTATGAGGAGGCCAATATTCCAGATTTTGATGATCAACTGTGGCTTCATTTTAATCGTCTTCCTGCTCGGTATGCATTTGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTGCTCATATGACACTGCTGAAGTTGGCAGAGGATCCGGCTAATCGACCTGCACTTCAAGTTCGCTTAGTACAGGTACAACCCTTTGATAGTGCAAATTATGGTGACTCTATGAACTCAGATCCCTCTGAGAATGAAGATGCACAGAGCTCTTTTAACTCTTCTTTTAAGCAGGGAATTCATCTGCCACCTACTTTTGGTTCCTCCTCTAATCTTGAAGCTCTTTCACGTAAAAGAAGCAAAATTAATATTGAAGACAGGGATGGTGCTGCGGATGTGATACCATACTCTTCCCAGCCCATGCATGAGATTACTTTTTCAACAGTTGACAAGCTTAAACTCCTTAGTCAGTTAACTGCATTACTTGGCGAGATTGGATTGAACATTCAAGAAGCTCATGCTTTTTCCACCAACGATGGCTTTTCTCTTGATGTATTTGTTGTTGATGGTTGGCCTAATGAGGATACTGAGGAGCTCAAAGCTGTATTGGAAAAGGAAATTTTGAAATTTAAGGAGCAATATATGTCAAAACAGGACACACATTATGCTGCCAATGACGATCATCAGGAAAGAATGGAACCCTTTCCTCCTTGCATAGAAATACCGTCTGATGGAACTGATGTCTGGGAAATTAATACCAACCTATTGAAATTTGAAAACAAAGTTGGCTCTGGATCATTCGGTGACTTGTACAAAGGCACATATTGCAGTCAAATTGTGGCTATCAAAGTCCTCAAACCTGAGCGCACAAATACAGATATGTTGAGAGAGTTTGCACAAGAAGTTTATATCATGAGGAAGATTCGACACAGGAATGTTGTGCAATTCATTGGAGCATGTACTCGACCACCAACTCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCCTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTGGCAATTGATGTTTCCAAGGGAATGAGTTATTTGCACCAAAATAATATCATACACAGGGATCTCAAGACTGCCAATCTGCTGATGGATGAAAATGAAGTGGTGAAGGTAGCGGATTTTGGAGTTGCCAGAGTGAAGATAGAATCTGGAGTGATGACAGCTGAAACTGGAACTTACCGTTGGATGGCCCCAGAGGTCATTGAACACAAACTTATGATCAGAAAGCAGATGTCTTCAGTTTTGGAATAA 1434 0.4163 MVIEEDVESCASRAVQSQKAHPRHHSQKLEVYNEVLRRIQESNYEEANIPDFDDQLWLHFNRLPARYAFDVNVERAEDVLAHMTLLKLAEDPANRPALQVRLVQVQPFDSANYGDSMNSDPSENEDAQSSFNSSFKQGIHLPPTFGSSSNLEALSRKRSKINIEDRDGAADVIPYSSQPMHEITFSTVDKLKLLSQLTALLGEIGLNIQEAHAFSTNDGFSLDVFVVDGWPNEDTEELKAVLEKEILKFKEQYMSKQDTHYAANDDHQERMEPFPPCIEIPSDGTDVWEINTNLLKFENKVGSGSFGDLYKGTYCSQIVAIKVLKPERTNTDMLREFAQEVYIMRKIRHRNVVQFIGACTRPPTLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMSYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVKIESGVMTAETGTYRWMAPEVIEHKLMIRKQMSSVLE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1866g00006 477 ProSiteProfiles ACT domain profile. 182 262 IPR002912 -
Pral1866g00006 477 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Pral1866g00006 477 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Pral1866g00006 477 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Pral1866g00006 477 SUPERFAMILY ACT-like 180 246 IPR045865 -
Pral1866g00006 477 Pfam Protein tyrosine and serine/threonine kinase 295 467 IPR001245 GO:0004672|GO:0006468
Pral1866g00006 477 ProSiteProfiles Protein kinase domain profile. 295 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1866g00006 477 SUPERFAMILY Protein kinase-like (PK-like) 274 465 IPR011009 -
Pral1866g00006 477 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Pral1866g00006 477 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 137 465 - -
Pral1866g00006 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Pral1866g00006 477 CDD STKc_MAP3K-like 301 465 - -
Pral1866g00006 477 Gene3D Transferase(Phosphotransferase) domain 1 374 472 - -
Pral1866g00006 477 Gene3D Phosphorylase Kinase; domain 1 284 373 - -
Pral1866g00006 477 MobiDBLite consensus disorder prediction 111 133 - -
Pral1866g00006 477 SMART serkin_6 295 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1866g00006 477 Coils Coil 232 252 - -
Pral1866g00006 477 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Pral1866g00006 477 CDD ACT_TyrKc 180 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1866g00006 Pral-Chr1866 19541 27712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1866g00006 2 465 MAP Kinase Kinase Kinase AT4G35780 69.957 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral1866g00006 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1866g00006 - - gmx:100816767 764.992