Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1864g00005 ATGCTTTCTATGCTGAACTCCCTTTTCACTCGAATAGGGAGCTTTGATTCCCCTGAAGATGCTTCTGTAAATTCCATGACACTATTTGTTGTTCTCGTGCTTTCCTGTGTTGTGATTGGACATCTTCTGGAAGAGAGCCGGTGGATGACTGAGTCAGTCATCGCATTACTCATTGGCCTTTTAAGTGGAACTATCATTCTACTAACAACTAAGGGGAAAAGTTCACGCATTTTAGTGTTTAGCGAAGAACTTTTTTTCATATATCTTCTTCCACCTATCATATTTAATGCAGGATTTCAGGTGAAAAAGAAGCAATTTTTCAAGAACTTCATGGCAATAATATTGTATGGTGTTATTGGGAGTATGATGTCATTTGTCATCATATCGCTAGGTTCAATTCAATTGCTGAAAGGATTAGACATTGGTATATTGGATCTGGGAGATTATTTTGCACTTGGGGCAGTATTTTCAGCTACGGATTCTGTCTGCACATTGCAGGTTCTTAATCAGGAAGAGACACCTCTTCTGTACAGTTTAGTTTTTGGCGAAGGTGTTGTCAATGATGCAACATCAGTGGTTCTTTTTAACGCAATCCAGAGATTTGACCTCTCTCATATCACCTCGGTCAATATCTTGCAGTTTTTTGGCAATTTCTTATATTTGTTCCTGTTCAGCACTTTTTTGGGAGTAGGGGTTGGCTTGATCAGTGCATATATTATAAAGAAGTTGTGTTTTGCCAGGCATTCTACAGATCGAGAAATTGCTCTTATGCTTCTGATGGCTTATTTATCTTATATGTTGGCTGAACTTGTTAATTTAAGTGGGATCCTTACCGTGTTCTTTTGTGGGATTGCCATGTCACACTACACTTGGCATAATGTTTCTGATTGTTCTAAAGTTACAAGCAGGCATGCTTTTGCAACTTTCTCATTTGTCTCTGAGATTTTTATCTTCTTATATGTCGGCATGGATGCCTTGGACATTGAAAAATGGAAATTTGCCAGCAAGAGTCCTTGGACATTAGTTGGAGCAAGTGGAATGCTGCTAGGCTTGGTTCTCCTTGGAAGAGCAGCTTTTGTGTTTCCCCTGTCAAGCATAGCCAATTTATTTAGGAAGTCTAACACCGAGAAAATTACATTCAAGCAGCAGGTTGTGATATGGTGGGCTGGGCTCATGCGTGGTGCTGTATCTGTGGCACTTGCATACAATAAGTTTACTAGATCAGGACATACTCAACTGCCCGGAAATGCCATCATGATTACCAGCACCATCATAGTTGTTCTCTTAACTAATGTGGTAGGAGGATTATTGACCAAGCCTCTGATGAGGCTATTATTGAATCCCCCTAGGCATTCGGGTATCTCAACGGATTCAGATTCATTACCCAGTAAGCGTTTGACTCTACCATTACTCTCCAGCGGGCATGATTCCGAATCTAACGTTGACATCGGTAATCCCCTTGATTCCAATCGTGCTGTTCATCATTATTGGCGAATCTTCGACGATTCATTTATGCGTCCTGTTTTTGGAGGGAGAGGATTTGCTCCTGTTGTTCCCAATTCCGAAACAGATGTGCTTCTGCGTTAG 1587 0.4077 MLSMLNSLFTRIGSFDSPEDASVNSMTLFVVLVLSCVVIGHLLEESRWMTESVIALLIGLLSGTIILLTTKGKSSRILVFSEELFFIYLLPPIIFNAGFQVKKKQFFKNFMAIILYGVIGSMMSFVIISLGSIQLLKGLDIGILDLGDYFALGAVFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQRFDLSHITSVNILQFFGNFLYLFLFSTFLGVGVGLISAYIIKKLCFARHSTDREIALMLLMAYLSYMLAELVNLSGILTVFFCGIAMSHYTWHNVSDCSKVTSRHAFATFSFVSEIFIFLYVGMDALDIEKWKFASKSPWTLVGASGMLLGLVLLGRAAFVFPLSSIANLFRKSNTEKITFKQQVVIWWAGLMRGAVSVALAYNKFTRSGHTQLPGNAIMITSTIIVVLLTNVVGGLLTKPLMRLLLNPPRHSGISTDSDSLPSKRLTLPLLSSGHDSESNVDIGNPLDSNRAVHHYWRIFDDSFMRPVFGGRGFAPVVPNSETDVLLR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1864g00005 528 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral1864g00005 528 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral1864g00005 528 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral1864g00005 528 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral1864g00005 528 Gene3D - 146 197 - -
Pral1864g00005 528 PANTHER SODIUM/HYDROGEN EXCHANGER 19 509 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pral1864g00005 528 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral1864g00005 528 NCBIfam sodium/hydrogen exchanger 3 28 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1864g00005 Pral-Chr1864 33957 40059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1864g00005 2 524 Antiporters AT3G05030 65.863 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1864g00005 - - qsu:112020558 684.1