Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1864g00004 ATGCTTTCTATGCTGAACTCCCTTTTCACTCGAATAGGGAGCTTTGATTCCCCTGAAGATGCTTCTGTAAATTCCATGACACTATTTGTTGTTCTCGTGCTTTCCTGTGTTGTGATTGGACATCTTCTGGAAGAGAGCCGGTGGATGACTGAGTCAGTCATCGCATTACTCATTGGCCTTTTAAGTGGAACTATCATTCTACTAACAACTAAGGGGAAAAGTTCACGCATTTTAGTGTTTAGCGAAGAACTTTTTTTCATATATCTTCTTCCACCTATCATATTTAATGCAGGATTTCAGGTGAAAAAGAAGCAATTTTTCAAGAACTTCATGGCAATAATATTGTATGGTGTTATTGGGAGTATGATGTCATTTGTCATCATATCGCTAGGTTCAATTCAATTGCTGAAAGGATTAGACATTGGTATATTGGATCTGGGAGATTATTTTGCACTTGGGGCAGTATTTTCAGCTACGGATTCTGTCTGCACATTGCAGGTTCTTAATCAGGAAGAGACACCTCTTCTGTACAGTTTAGTTTTTGGCGAAGGTGTTGTCAATGATGCAACATCAGTGGTTCTTTTTAACGCAATCCAGAGATTTGACCTCTCTCATATCACCTCGGTCAATATCTTGCAGTTTTTTGGCAATTTCTTATATTTGTTCCTGTTCAGCACTTTTTTGGGAGTAGGGGTTGGCTTGATCAGTGCATATATTATAAAGAAGTTGTGTTTTGCCAGGCATTCTACAGATCGAGAAATTGCTCTTATGCTTCTGATGGCTTATTTATCTTATATGTTGGCTGAACTTGTTAATTTAAGTGGGATCCTTACCGTGTTCTTTTGTGGGATTGCCATGTCACACTACACTTGGCATAATGTTTCTGATTGTTCTAAAGTTACAAGCAGGCATGCTTTTGCAACTTTCTCATTTGTCTCTGAGATTTTTATCTTCTTATATGTCGGCATGGATGCCTTGGACATTGAAAAATGGAAATTTGCCAGCAAGAGTCCTTGGACATTAGTTGGAGCAAGTGGAATGCTGCTAGGCTTGGTTCTCCTTGGAAGAGCAGCTTTTGTGTTTCCCCTGTCAAGCATAGCCAATTTATTTAGGAAGTCTAACACCGAGAAAATTACATTCAAGCAGCAGGTTGTGATATGGTGGGCTGGGCTCATGCGTGGTGCTGTATCTGTGGCACTTGCATACAATAAGTTTACTAGATCAGGACATACTCAACTGCCCGGAAATGCCATCATGATTACCAGCACCATCATAGTTGTTCTCTTAACTAATGTGGTAGGAGGATTATTGACCAAGCCTCTGATGAGGCTATTATTGAATCCCCCTAGGCATTCGGGTATCTCAACGGATTCAGATTCATTACCCAGTAAGCGTTTGACTCTACCATTACTCTCCAGCGGGCATGATTCCGAATCTAACGTTGACATCGGGAATGTGGTAGTATGTATTTGTCATCCCCCAGAAGAAGCAGAAGAAAGATGTAACGGAAGTAGCTCCTCTCCAACAAGTGGAGACTCCACTACGACTGAAGACTGTTGGGATTAA 1566 0.4074 MLSMLNSLFTRIGSFDSPEDASVNSMTLFVVLVLSCVVIGHLLEESRWMTESVIALLIGLLSGTIILLTTKGKSSRILVFSEELFFIYLLPPIIFNAGFQVKKKQFFKNFMAIILYGVIGSMMSFVIISLGSIQLLKGLDIGILDLGDYFALGAVFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQRFDLSHITSVNILQFFGNFLYLFLFSTFLGVGVGLISAYIIKKLCFARHSTDREIALMLLMAYLSYMLAELVNLSGILTVFFCGIAMSHYTWHNVSDCSKVTSRHAFATFSFVSEIFIFLYVGMDALDIEKWKFASKSPWTLVGASGMLLGLVLLGRAAFVFPLSSIANLFRKSNTEKITFKQQVVIWWAGLMRGAVSVALAYNKFTRSGHTQLPGNAIMITSTIIVVLLTNVVGGLLTKPLMRLLLNPPRHSGISTDSDSLPSKRLTLPLLSSGHDSESNVDIGNVVVCICHPPEEAEERCNGSSSSPTSGDSTTTEDCWD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1864g00004 521 Gene3D - 146 197 - -
Pral1864g00004 521 PANTHER SODIUM/HYDROGEN EXCHANGER 19 445 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pral1864g00004 521 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral1864g00004 521 MobiDBLite consensus disorder prediction 500 521 - -
Pral1864g00004 521 MobiDBLite consensus disorder prediction 497 521 - -
Pral1864g00004 521 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral1864g00004 521 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral1864g00004 521 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral1864g00004 521 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral1864g00004 521 NCBIfam sodium/hydrogen exchanger 3 28 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1864g00004 Pral-Chr1864 33957 40536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1864g00004 2 471 Antiporters AT3G05030 68.565 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1864g00004 - K14724 qsu:112020558 643.269