Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1857g00001 ATGATTGATCAGCAACATCCCGCCATCCCAGAAATTAATACCACAAACCCCACCACGGCAATCCTGGGAGGTACTGCGGCAGCTGGAGGGGTCAAAGATGAAGATGATGATGGGTTGAATAATGGGGAGGAAGAGAACAAGTGGCCGCCATGGCTGAGGCCGCTTCTGCAAACTAGCTTCTTCGTTCAATGCAAAGTCCACGCCGATTCGCACAAGAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCCCTCTGCTCTGCTTGCTTGGCTTCTCACAAAGACCACAGAGCTATTCAGATAAGGAGGTCTTCATACCATGACGTGATTAGAGTGTCTGAGATTCAGAAATTTCTGGACATAACAGGGGTCCAGACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAGGGCGTCACCAATACCTGCCAGGTCTGTGAACGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGATGCAAGGTTGTTGGAACGTCCAAGAAGTTCAGGAAGAGGAAAATGTTGGCTGAGCAAGAGGGTTCTGATCGTGAAGAATCAATGAATGGGCATAGCAATGGAAGAACCAGGAGTAGAATCCAGAGCTTCACGCCATCGACTCCACCACCGACGGCGATGAACTACCGAGCTGCCAAGAGAAGGAAGGGAATTCCTCACAGGGCCCCATTTGGAGCAGGACTGATCATACAATACTGA 753 0.4914 MIDQQHPAIPEINTTNPTTAILGGTAAAGGVKDEDDDGLNNGEEENKWPPWLRPLLQTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHKDHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKVVGTSKKFRKRKMLAEQEGSDREESMNGHSNGRTRSRIQSFTPSTPPPTAMNYRAAKRRKGIPHRAPFGAGLIIQY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1857g00001 250 MobiDBLite consensus disorder prediction 205 223 - -
Pral1857g00001 250 MobiDBLite consensus disorder prediction 188 223 - -
Pral1857g00001 250 MobiDBLite consensus disorder prediction 188 204 - -
Pral1857g00001 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 43 242 - -
Pral1857g00001 250 CDD Bbox2 64 103 - -
Pral1857g00001 250 Pfam PLATZ transcription factor 104 175 IPR006734 -
Pral1857g00001 250 MobiDBLite consensus disorder prediction 8 22 - -
Pral1857g00001 250 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1857g00001 Pral-Chr1857 10488 12817 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pral1857g00001 PLATZ 3.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1857g00001 - - gmx:100792668 396.741