Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1852g00006 ATGGGTTCTTCGGCCCAAATAGAGGACGTCGTTGTGGTGGACATTGAGAAGAAAGCTGAGGAACCTAATGAATGGTCTCAGTGGGTGCTCAATGCTCCTGAGCCTCCCAGTCTGTGGCATGAACTTGCAGGCTCAGTGAGCAACACCATTTCACGGTATCAAGGAAAGGCGTCTGGTCCCAGAAGCCAATCCGGACCCAAAATTATGGTTTCATTCCTGCAAGCCATGTTTCCTGTTCTTGGCTGGGGTCGAAACTATTCAGCCATAAGCTTCAGGAATGATTTACTCGCAGGTCTCACTATTGCAAGTCTCTGCATTCCGCAGGGCATTGGGTATGCAACTTTAGCGAGGCTGGATCCTGAATATGGCCTCTATACCAGTGCGGTGCCGCCTCTTATCTATGCAATGATGGGAAGTTCAAGGGAGGTGGCAATTGGACCGGTGGCCGTGGTTTCATTGTTGTTGTCGTCAATGATTCAGAAACTAATAGACCCTTCCACTGATCCTTTGGGTTACACAAAGCTGGTTCTGACTGCCACTTTATTTGCCGGCATATTCCAGGCTGCCTTCGGACTCTTGAGGTTGGGGTTCTTGCTGGAATTTCTGTCGCATGCTGCTATAGTAGGATTCACAGCGGGAGCGGCCATTGTTATTGGACTTCAACAGCTGAAGGGCCTTTTTGGGTTCCAACGCTTTACCAACAAAACCGACGTCGTCTCTGTCACCATGTCTGTTCGCGAATCTCTTGATCATCCTCTGCAGTGGAATTACCTCAATGTTGTGCTGGGATGCTCGTTCCTCATTTTGATGCTCATATCCAGATTTCTGGGTAAAAGGAACAGAAAACTATTTTGGCTGCCAGCAATCTCCCCTCTCGCATCGGTTGTGCTATCAACCCTCATTGTTTTTCTCACCCGAGCTGATAAACATGGAGTTAATATTGTGAAACACGTAAAAGGAGGGCTGAATCCAAGTTCCGTTCATCTTTTAGAGCTGAACAGCCCCTATATTGGAGAAGTCGCCAAAATCGGACTGGTTGCTTCTGTTATTGCACTCACTGAATCGGTTTCAGTCGGCCGATCTTTTGCTTCCATGAGAGGATACCACATTGATGGAAACAAAGAAATGGTGTCCATCGGATTCATGAACATTATAGGGTCTTTCACATCATGCTACGTTGCAACTGGTTCGTTTTCGCGCACGGCGGTGAATGTGGCGGCGGGATGTGAAACTGCAGGGTCAAACATCGTGATGGCTATTACGGTGGTTATCTCGTTGCTATGCTTCACGAAGCTCTTATATTTCACTCCAACGGCGATTCTTGCCTCAATCATCATTTCTGCTCTCCCAGGACTCGTAGACTTCAATGAGGCTTACAGAATATGGAAGCTTGATAAGCTTGATTTTCTTGCTTGCGCCGGAGCCTTCTTTGGGGTCCTCTTCTCTTCCGTCGAGATTGGCCTCCTGGTGGCCGTGGCGATATCCTTTACAAATATAATAATGATCTCAATTCGACCCGGCACAGAAACTCTCGGAAGACTCCCTGAAACAGACTGGTTCTGCGATGTCCATCAGTATCCTATGGCTGTTAAGACTGCTGGAGTCTTAATAATACGTGTCAAGTCTGCCTTGCTTTGCTTTGCTAATGCCAACTTCGTTACAGAAAGGATCATGAAACTGATCACAGACGAAGAAGAAGAAGAAGAAGCCAATGAGAACGAGGGAGACACCAAAAGGACAATTCAGCTCGTAATCATCGACGCCTCCAATTTAATGAACATCGACACGTCAGGAATTGCTTCTCTAGAGGAACTACACAAGAGTTTGGTTTCACATGGGAAACAGTTAGCAATCGCCAACCCCAGGTGGCAAGTGATTCACAAGCTGAAGGCTGCTAACTTCGTCAGAACAATCGGTGGAAGGGTCTTCTTGACTGTTGCGGAAGCTGTCGGGTGTAAACTGGATCCAGTCTAA 1974 0.4732 MGSSAQIEDVVVVDIEKKAEEPNEWSQWVLNAPEPPSLWHELAGSVSNTISRYQGKASGPRSQSGPKIMVSFLQAMFPVLGWGRNYSAISFRNDLLAGLTIASLCIPQGIGYATLARLDPEYGLYTSAVPPLIYAMMGSSREVAIGPVAVVSLLLSSMIQKLIDPSTDPLGYTKLVLTATLFAGIFQAAFGLLRLGFLLEFLSHAAIVGFTAGAAIVIGLQQLKGLFGFQRFTNKTDVVSVTMSVRESLDHPLQWNYLNVVLGCSFLILMLISRFLGKRNRKLFWLPAISPLASVVLSTLIVFLTRADKHGVNIVKHVKGGLNPSSVHLLELNSPYIGEVAKIGLVASVIALTESVSVGRSFASMRGYHIDGNKEMVSIGFMNIIGSFTSCYVATGSFSRTAVNVAAGCETAGSNIVMAITVVISLLCFTKLLYFTPTAILASIIISALPGLVDFNEAYRIWKLDKLDFLACAGAFFGVLFSSVEIGLLVAVAISFTNIIMISIRPGTETLGRLPETDWFCDVHQYPMAVKTAGVLIIRVKSALLCFANANFVTERIMKLITDEEEEEEANENEGDTKRTIQLVIIDASNLMNIDTSGIASLEELHKSLVSHGKQLAIANPRWQVIHKLKAANFVRTIGGRVFLTVAEAVGCKLDPV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1852g00006 657 SUPERFAMILY SpoIIaa-like 532 650 IPR036513 -
Pral1852g00006 657 Pfam STAS domain 526 649 IPR002645 -
Pral1852g00006 657 PANTHER SULFATE TRANSPORTER 67 651 IPR001902 GO:0016020|GO:0055085
Pral1852g00006 657 Pfam Sulfate permease family 91 473 IPR011547 GO:0016020
Pral1852g00006 657 CDD STAS_SulP_like_sulfate_transporter 526 644 - -
Pral1852g00006 657 ProSiteProfiles STAS domain profile. 545 653 IPR002645 -
Pral1852g00006 657 NCBIfam sulfate permease 78 646 IPR001902 GO:0016020|GO:0055085
Pral1852g00006 657 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Pral1852g00006 657 Gene3D STAS domain 505 653 IPR036513 -
Pral1852g00006 657 FunFam Sulfate transporter 31 505 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1852g00006 Pral-Chr1852 31886 37063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1852g00006 20 650 Inorganic Solute Cotransporters AT5G10180 64.976 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1852g00006 K17469 - gmx:100775538 917.146