Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1847g00013 ATGCCATCGTCATCAATGTCTCTTCTCTTCCTCCTCCTCCTCCTCCTCCTCGCTTTCTCACGGCCTCACCTATCTGCAAACAACGCGCCTTGCCCCCTCAAATTCACCATCCTTCGCGACGTCACCGGCAGTGTCAGACTACCTCGCGATCCCTCCACCCACTGCCAGTACGTCCGCAATGCTCTCCATCTTGTTCAATCCGATTATCTCCGCCGCTCTGGCTTCTTCCTTCCTCCCCTCAACTCTTCTGACTCCTGTTGGCATGATTTCCACTCTCACACTCGTCAATTTGACTCCAACTTTGATATTCGTTTCTCTTGTGGATTTCGAACCAGCTGGATCTCCCAGGGATGTATGAATATCACTACCCGAAAACAATTCGAAGCCTTTGTTTCCGAGCCGGTTCTTCAAGATGTGCAGTCGATTTGTAGTCACTCGCTTGCGCATAAATCCCCTTGCGCTCTTTGTATTACTAGCCTGGCCAAGTTGTCCGCTTTGTACTTGAGGGGACCGTCGACTGGGAATGTCTCCAATTGCAGGGACTATTCATCAATTTATGCCGCTGCTTTCGTCAATCAGTATGGTCCCACCGACACCGGGATTGCTAAGTGCTTATTCTCCATGGATCTTGAATCTGCGAGCTCCAGTCGCAGGGTGGAGCACATTGTTATTGCGCTTGCTTTTGTCTTTTGTGTGTTGGGTTTGTTATTCGTGATTGGTGGGTTCTGGCTTTGTCAGAGATTGAACAAGAATAAGAAGAGAGTGAGAAAGTACAATATTAGCAGAACTGAGACGGTGCTCAATTCTGGGTTGAATTCCTTGAATGAGAGCACCACCTTGATCAGGTTCGCATTTGATGACATTAGGAAGGCAACTAGGAACTTCAGCCTGGACAACGTAATTGGGAGAGGAGGATACGGGAACGTGTATGGAGGCGTGTTACCTGATGGGAGTGAAGTTGCAGTGAAAAGATTCAAGAACTGTTCGGCTGCAGGGGATGCGAGTTTCACTCACGAAGTTGAGGTCATTGCAAGCGTGAGGCATGTAAACCTTGTCGCCCTGAGAGGCTATTGCACTGCCACAACTAACTTAGAGGGTCACCAGAGGATTATTGTCTGTGATTTGATGAAGAATGGGAGTCTTCAAGATCATTTGTTCGGTTCTCCGGGGAAGAAACTCAGTTGGCCGACCCGTCAAAAGATTGCACTGGGCACTGCAAGAGGATTGGCTTATCTGCATTACGGGGCCCAGCCAACCATCATCCATAGGGATATAAAAGCCAGCAATATACTTCTGGACGACAAGTTTGAAGCAAAAGTCGCAGACTTTGGACTTGCAAAATTCTACTCGGAGGGAATGACGCACATGAGCACTAGGGTAGTTGGAACTATGGGGTATGTTGCCCCGGAGTATGCATTGTATGGACAGTTAACGGAAAGAAGTGATGTTTTCAGTTATGGTGTTGTGCTTCTTGAACTCTTGAGTGGGAGAAAAGCTCTTCAAATGGACGACGATGGCCAACCCTCTGCTCTCGCTGATTGGGCCTGGTCACTGGTTAGAACAGGTCGACCTTTGGATGTAATTGAAGTTGGGATGCCAGAAACTGGTGCACCACAGGTTATGGAGAAATATGTGTTGGTTGCTGTAGTTTGTTCTCACCCACAGTTATATGCGAGGCCGACAATGGACCAGGTGATGAGGATGTTGGAGTCAGATGAATCAGTACCGGCTATTCCTCAGAGACCCATTCCTCTGGTTGCTAGGAGGACTGATGTTGAGAGAGCTACCAGCAGTTGTACATTTGAGGGTGACCATCATTCTTTTAATTCTAAGAATGAAAATGAACCAAGTTGA 1854 0.479 MPSSSMSLLFLLLLLLLAFSRPHLSANNAPCPLKFTILRDVTGSVRLPRDPSTHCQYVRNALHLVQSDYLRRSGFFLPPLNSSDSCWHDFHSHTRQFDSNFDIRFSCGFRTSWISQGCMNITTRKQFEAFVSEPVLQDVQSICSHSLAHKSPCALCITSLAKLSALYLRGPSTGNVSNCRDYSSIYAAAFVNQYGPTDTGIAKCLFSMDLESASSSRRVEHIVIALAFVFCVLGLLFVIGGFWLCQRLNKNKKRVRKYNISRTETVLNSGLNSLNESTTLIRFAFDDIRKATRNFSLDNVIGRGGYGNVYGGVLPDGSEVAVKRFKNCSAAGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVCDLMKNGSLQDHLFGSPGKKLSWPTRQKIALGTARGLAYLHYGAQPTIIHRDIKASNILLDDKFEAKVADFGLAKFYSEGMTHMSTRVVGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALQMDDDGQPSALADWAWSLVRTGRPLDVIEVGMPETGAPQVMEKYVLVAVVCSHPQLYARPTMDQVMRMLESDESVPAIPQRPIPLVARRTDVERATSSCTFEGDHHSFNSKNENEPS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1847g00013 617 Gene3D Transferase(Phosphotransferase) domain 1 376 577 - -
Pral1847g00013 617 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 376 577 - -
Pral1847g00013 617 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Pral1847g00013 617 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 256 374 - -
Pral1847g00013 617 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 601 - -
Pral1847g00013 617 Gene3D Phosphorylase Kinase; domain 1 256 374 - -
Pral1847g00013 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Pral1847g00013 617 SUPERFAMILY Protein kinase-like (PK-like) 279 590 IPR011009 -
Pral1847g00013 617 ProSiteProfiles Protein kinase domain profile. 295 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1847g00013 617 Pfam Protein kinase domain 297 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1847g00013 617 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1847g00013 617 MobiDBLite consensus disorder prediction 594 617 - -
Pral1847g00013 617 Pfam SPARK 26 179 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1847g00013 Pral-Chr1847 64430 66600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1847g00013 8 594 Receptor kinase-like Gene Family AT2G48010 60.745 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pral1847g00013 Pkinase 5.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1847g00013 - - gmx:100794233 774.622