Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1844g00015 ATGATGAATAACTCTGTCTCAGATAACAGCTTTTACATCGAGAGTGATGAAGATGAGGAAAAGGAGCTTAACAAAGAAGAAGCTGATGCTGATGGCAATGATTCAGATTCTTCAAATTTTTCAAATGAAAACCAGCAGTCGAACAAACCCAGTTCGTATAACGTCTCATGGCCGCAGAGTTACAGGCAGTCAATGGATCTATACAGTAGTGTGCCGTCACCAAATATCGGATTTCTGGGCACTCCCTCACTGTCCAGATTAAGCAGCTCCTTTCTTTCCACATCTCTGACAAGAAGGCACACTCCTGAAACGCTACCTTCTGCAAAACCTCTGTTACAACCCACAGCTGATGAGCCACAGAGGCGAAGCTCTCATACTTTGCTTCCTCCTATTCCTTCTAGAAGGTCTATGATTAAGAAGGATGCTGCAAAGGTTTCTCATGAAGTCCCAATTCCTCGCCATTGCTCTTATGGACAAGCTGTGCTTAATGGCATAAATGTTCTTTGCGGCGTAGGAATCCTTTCCACCCCTTATGCTGCCAAAGAAGGTGGATGGCTTGGGCTTTCTATTTTATTAATTTTTGCAGTTCTTTCCTTTTACACGGGGATCCTCTTGCGTGCCTGCTTGGATAGTGAACCTGGGCTGGAAACGTACCCTGACGTTGGCCAAGCTGCTTTTGGAACTACAGGACGTATTGCCATCTCAATAGTGCTGTACGTGGAACTATATGCTTGTTGCATAGAGTATATAATTCTGGAGAGCGATAACTTGTCTTCATTATTTCCAAATGCAAGCTTAAGTTTGGGTGGTGTTGAATTGAATTCACATGTTCTATTTGCACTGTTGACCACCTTGGCTGTTCTTCCTACTGTTTGGCTCCGTGACCTAAGTATTCTCAGTTACATCTCAGCTGGAGGAGTTGTTGCATCAATTTTGGTGTCTCTTTGCCTGTTGTGGATTGGGCTGGTAGATGGAGTTGGCTTTGAGCACAAAGGAACACCATTGAATCTTGCGAGTCTCCCTGTTGCTTTGGGTGTATATGGTTACTGTTATTCAGGACATGCGGTGTTCCCAAATATCTATACATCAATGGCAAATCCAAATCAATTCCCTGCAGTGCTATTAGCATGCTTTGGTATTTGTACCTTGTTGTATGCTGGGGTGGCTGTTATGGGGTACACAATGTTTGGTGAAGCTACACTTTCTCAGTTCACACTTAACTTGCCTCCAGATTTAGTGGCCACCAAGGTTGCTGTGTGGACTACGGTGGTCAATCCATTCACCAAGTATGCATTGACTATATCTCCAGTAGCAATGAGTCTGGAGGAGTTGATACCGGCAACCAACGCTAAGTCTTATCTATATTCCATCTTCATCAGAACAGGACTGGTAGTTTCTACGCTCGTTGTTGGTCTTTCAGTTCCCTTCTTTGGAGAAACTTGA 1443 0.4394 MMNNSVSDNSFYIESDEDEEKELNKEEADADGNDSDSSNFSNENQQSNKPSSYNVSWPQSYRQSMDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPETLPSAKPLLQPTADEPQRRSSHTLLPPIPSRRSMIKKDAAKVSHEVPIPRHCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILLIFAVLSFYTGILLRACLDSEPGLETYPDVGQAAFGTTGRIAISIVLYVELYACCIEYIILESDNLSSLFPNASLSLGGVELNSHVLFALLTTLAVLPTVWLRDLSILSYISAGGVVASILVSLCLLWIGLVDGVGFEHKGTPLNLASLPVALGVYGYCYSGHAVFPNIYTSMANPNQFPAVLLACFGICTLLYAGVAVMGYTMFGEATLSQFTLNLPPDLVATKVAVWTTVVNPFTKYALTISPVAMSLEELIPATNAKSYLYSIFIRTGLVVSTLVVGLSVPFFGET 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1844g00015 480 MobiDBLite consensus disorder prediction 34 57 - -
Pral1844g00015 480 Pfam Transmembrane amino acid transporter protein 156 478 IPR013057 -
Pral1844g00015 480 PANTHER OS05G0424000 PROTEIN-RELATED 164 479 - -
Pral1844g00015 480 MobiDBLite consensus disorder prediction 1 57 - -
Pral1844g00015 480 FunFam Amino acid transporter AVT1A 153 480 - -
Pral1844g00015 480 MobiDBLite consensus disorder prediction 98 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1844g00015 Pral-Chr1844 87771 95612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1844g00015 2 479 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.222 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1844g00015 K15015 - gmx:100775840 723.776