Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1844g00014 ATGATGAATAACTCTGTCTCAGATAACAGCTTTTACATCGAGAGTGATGAAGATGAGGAAAAGGAGCTTAACAAAGAAGAAGCTGATGCTGATGGCAATGATTCAGATTCTTCAAATTTTTCAAATGAAAACCAGCAGTCGAACAAACCCAGTTCGTATAACGTCTCATGGCCGCAGAGTTACAGGCAGTCAATGGATCTATACAGTAGTGTGCCGTCACCAAATATCGGATTTCTGGGCACTCCCTCACTGTCCAGATTAAGCAGCTCCTTTCTTTCCACATCTCTGACAAGAAGGCACACTCCTGAAACGCTACCTTCTGCAAAACCTCTGTTACAACCCACAGCTGATGAGCCACAGAGGCGAAGCTCTCATACTTTGCTTCCTCCTATTCCTTCTAGAAGGTCTATGATTAAGAAGGATGCTGCAAAGGTTTCTCATGAAGTCCCAATTCCTCGCCATTGCTCTTATGGACAAGCTGTGCTTAATGGCATAAATGTTCTTTGCGGCGTAGGAATCCTTTCCACCCCTTATGCTGCCAAAGAAGGTGGATGGCTTGGGCTTTCTATTTTATTAATTTTTGCAGTTCTTTCCTTTTACACGGGGATCCTCTTGCGTGCCTGCTTGGATAGTGAACCTGGGCTGGAAACGTACCCTGACGTTGGCCAAGCTGCTTTTGGAACTACAGGACGTATTGCCATCTCAATAGTGCTGTACGTGGAACTATATGCTTGTTGCATAGAGTATATAATTCTGGAGAGCGATAACTTGTCTTCATTATTTCCAAATGCAAGCTTAAGTTTGGGTGGTGTTGAATTGAATTCACATGTTCTATTTGCACTGTTGACCACCTTGGCTGTTCTTCCTACTGTTTGGCTCCGTGACCTAAGTATTCTCAGTTACATCTCAGCTGGAGGAGTTGTTGCATCAATTTTGGTGTCTCTTTGCCTGTTGTGGATTGGGCTGGTAGATGGAGTTGGCTTTGAGCACAAAGGAACACCATTGAATCTTGCGAGTCTCCCTGTTGCTTTGGGTGTATATGGTTACTGTTATTCAGGACATGCGGTGTTCCCAAATATCTATACATCAATGGCAAATCCAAATCAATTCCCTGCAGTGCTATTAGCATGCTTTGGTATTTGTACCTTGTTGTATGCTGGGGTGGCTGTTATGGGGTACACAATGTTTGGTGAAGCTACACTTTCTCAGTTCACACTTAACTTGCCTCCAGATTTAGTGGCCACCAAGGTTGCTGTGTGGACTACGGTGGTCAATCCATTCACCAAGTATGCATTGACTATATCTCCAGTAGCAATGAGTCTGGAGGAGTTGATACCGGCAACCAACGCTAAGTCTTATCTATATTCCATCTTCATCAGAACAGGACTGGTAGTTTCTACGCTCGTTGTTGGTCTTTCAGTTCCCTTCTTTGGTCTGGTGATGTCGTTGATTGGTTCTTTACTCACAATGCTTGTTACGTTGATTCTTCCATGTGCTTGTTTCCTGAGAATCTTGCGTGGCAGAGTCTCAAGCCTTCAGGCATCACTTTGCATTGCAGTGATCACAGTAGGAGTTGCATCATCTGCCTATGGATCCTACTCGGCCCTCACCAAGATTATTGAAAGCTTGAAACAATGA 1638 0.4408 MMNNSVSDNSFYIESDEDEEKELNKEEADADGNDSDSSNFSNENQQSNKPSSYNVSWPQSYRQSMDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPETLPSAKPLLQPTADEPQRRSSHTLLPPIPSRRSMIKKDAAKVSHEVPIPRHCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILLIFAVLSFYTGILLRACLDSEPGLETYPDVGQAAFGTTGRIAISIVLYVELYACCIEYIILESDNLSSLFPNASLSLGGVELNSHVLFALLTTLAVLPTVWLRDLSILSYISAGGVVASILVSLCLLWIGLVDGVGFEHKGTPLNLASLPVALGVYGYCYSGHAVFPNIYTSMANPNQFPAVLLACFGICTLLYAGVAVMGYTMFGEATLSQFTLNLPPDLVATKVAVWTTVVNPFTKYALTISPVAMSLEELIPATNAKSYLYSIFIRTGLVVSTLVVGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGRVSSLQASLCIAVITVGVASSAYGSYSALTKIIESLKQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1844g00014 545 MobiDBLite consensus disorder prediction 34 57 - -
Pral1844g00014 545 FunFam Amino acid transporter AVT1A 153 542 - -
Pral1844g00014 545 MobiDBLite consensus disorder prediction 1 57 - -
Pral1844g00014 545 PANTHER OS05G0424000 PROTEIN-RELATED 164 520 - -
Pral1844g00014 545 MobiDBLite consensus disorder prediction 98 131 - -
Pral1844g00014 545 Pfam Transmembrane amino acid transporter protein 156 534 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1844g00014 Pral-Chr1844 86578 95263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1844g00014 2 478 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.371 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1844g00014 K15015 - gmx:100775840 816.224