Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1844g00008 ATGCTTTGGTCATGGTTAGCCATTGTGGTTTTGACTCTGAGCTCCTTGAATTTGGTCCAGTGCCAAGTTAACAGTGGCCCCAATCCATTCGGTGATTCTTCTGGTGCTCTTCCCTTTATGACACAGCTTGTGAATGCCCAACTCTCCAATCTTACTAGAGATCTCAGCAAGGAAATCAAAAGCCAGTCCAGCTTCTGCGTCAAAGACCCGGAAGCTGAGTGGAACAAGGCATTTAACTTTTCATCCGATTTAAGCTTCTTGACTTCTTGCATTCAGAAAACTCAAGGAGATATTACACGACGTTTCTGCACGGTAGCAGAAGTGAAGTCTTATTTTAGAAGTATAACTGAAAAAATTGGAAGCACCAGTTACTTGAAGCCTAACAGGAATTGCAATTTAACTTCATGGGGCTCTGGGTGTGAGCCTGGATGGGCGTGTAGTACTGACCCAGATCAGCAGGTTGACCTTAGAACTTCACAGGATATCCCAGCAAGAACTACAAGCTGCCAGGCATGTTGTGAGGGTTTCTTCTGTCCCCAGGGTCTTACCTGCATGATACCTTGTCCATTGGGTTCCTATTGTCCCCTAGCAACACTGAATCGAACAAGTGGTTTATGTGAACCATATCAGTACCGGCTACCAGCAAACCAGCCAAACCATACATGTGGAGGAGCAAATATTTGGGCTGATGTTGATAACAGTGAAGAAGTATTTTGTCCAGCAGGATCCTATTGTCCATCAACCACCAAAAAAATCCCTTGCAGTAATGGAAATTACTGCAGGATGGGGTCCACATCTGAGAAACGCTGCTACAATTTGGTGCCATGTAAGTCGGGCACTGAAAGTCAGAACCTTCATGTATATGGAATCATGTTCATAGTTGGTTTGAGTACTTTGCTACTTGTTATTTACAGCTGCTCTGATCAAGTACTCTCAATTAGGGAAAGAAGGCTAGCCAAATCAAGAGATGCAGCTGCTAGAAGTGTAAAGAGCTCAGCACAAGCACGTAGAAGGTGGAAAGATGCTAAAGATTCCGTTACGAGGCATGCTAGCAGGCTTCAATCTCATTTGTCTTTCTCATTTTCACATCAAAAGAATATAGCTCACTCCGAAGAACTTCAGATTTTAAATCAAGTGATCCCTGAGGCAGATGGTGACTTGTTATCACCCTTACCTCCGAACGCTTCAAGGGCAACTTTGGATTCCAGAAATCAGATAGAAACTGGGCATGAAATTGAAAATGAATCTATTGTCCATGATGAGTTTGATATGGAAGATGGACATCGGGTTGTCACTGCAAATAGTTCCAAGGGTAAAAAACTACATGCCCGTAGCAAGATATTCAGGCATGCGTATTCTCAGCTTGAGAAAGAGAAGGCTCGGCAACAAGAATACAAGAACCTTACCTTCTCAGGAGTAATTAGCATGGCCTCCAACAGTGAACAAAGAAAAAGACCTCTTATTGAGATTTCATTCAAAGATCTGAGTCTTATTTTAAAATCACAAAACAAGTATATACTGCGATGTGTTACTGGCAATATAAAACCAGGTCATATTACTGCTGTCATGGGTCCTTCAGGAGCTGGTAAAACAACATTTCTTTCAGCACTTGCAGGAAAAGCACTTGGATGCAAGAAGAGTGGTTTAATATTAATAAATGGAAAGAATGAATCAATTCACTCTTATAAGAAAATTATCGGTTTTGTGCCCCAAGATGATATCGTTCATGGAAACCTGACAGTGGAAGAAAATCTCTGGTTCAGTGCAAATTGCAGGCTCTCTGCTGAATCTTCAAAAGCGGATAAAGTAGTGGTTGTTGAAAGAGTTATTGAATTCTTGGGACTTCACTCTGTGCGAAATTCCCTCGTTGGAACAGTAGAAAAGCGAGGGATATCTGGAGGCCAAAGGAAGCGAGTGAATGTTGGATTGGAAATGGTTATGGAACCCTCATTACTAATCCTGGATGAACCCACATCAGGCTTGGATAGTGCATCATCTCAGTTACTTCTTAGAGCACTTCGACGTGAAGCTCTTGAAGGGGTGAATGTCTGCATGGTAGTTCATCAACCTAGCCATACATTATTCAAGATGTTTGATGATCTGGTACTCCTGGCAAAAGGCGGTCTTACTGTCTACCATGGACCTGTTAATAGGGTTGAAGAATACTTTGCAGGCCTTGGGATCTTTATCCCTGAGCGCATTAACCCTCCGGACTACTTTATTGACATTTTGGAGGGAGTGATAAAACCTAGTGGACGCTCAGGAGTGAAGTATGATGAGCTCGCAGTTAGATGGATGCTTCATAATGGTTACTCAGTGCCTCCTGATATGCAAAAAAGTAACATGCCATCCAGGCTTCTAAATCCAATTAATGAAACAAATAATGATGATGCTGTTAATGAGGAACCATCCTTCACTGGAGAGTTATGGAAAGATGTCAAAGGTAACATAGAGATGCATCAAGAGAAGTTAAGGCTAAACTTTTTAAAGTCCAAGGATTTATCAAATCGGAGAACTGCTAGTCTGTTCTGGCAATATAAGTACTTCCTTGCTAGAGTTGCTAAGCAGCGACTTAGGGATGCCAAAGCGCAAGCCATAGACTATCTGATTTTATTACTTGCTGGAGCCTGCCTAGGATCAGTTATCAAAATGAGGGATCAATCGCTTGGTGCAGCAGGATACACATACACAGTGATTGCTGTTTCTCTTCTCTGCAAAATAGCAGCTTTGAGATCATTTTCTCTGGAGAAATTACAATACTGGAGGGAGAGTGCTTCAGGCATGAGCAGCCTAGCTTATTTTCTCTCTAGGGACACAATTGACCATTTTAATACAGTGATCAAGCCCGCCGTGTATCTATCTATGTTCTTTTTCTTCACTAACCCGAGGTCTACTTTTGTTGATAATTACACTGTGCTCCTCTGCCTTGTGTACTGTGTGACTGGCATGGGGTATGCACTGGCCATTGTCTTTGAACCTGGAGCTGCTCAATTGTGGTCAGTGCTTCTCCCAGTTGTTTTGACTCTAGTCGCCACGCAACCGAGAGACAGTGAATTTATGAAACGCATATCTGACGTGTGCTACACCAAATGGGCTCTGCAGGCATTTGTAATCGCTAATGCTGAAAGGTATGATAAAGTGTGGCTCATAACTCGTTGTGGTGCCCTTAAGACAAATGATTACAATCTTTCAGATTGGAGTTTGTGCATCTCAATACTTATCCTCTTTGGAGTAGTGAGTCGTGCGATTGCATTCATCTGTATGTTAACCTTTAGAAGGAAGTAA 3285 0.4234 MLWSWLAIVVLTLSSLNLVQCQVNSGPNPFGDSSGALPFMTQLVNAQLSNLTRDLSKEIKSQSSFCVKDPEAEWNKAFNFSSDLSFLTSCIQKTQGDITRRFCTVAEVKSYFRSITEKIGSTSYLKPNRNCNLTSWGSGCEPGWACSTDPDQQVDLRTSQDIPARTTSCQACCEGFFCPQGLTCMIPCPLGSYCPLATLNRTSGLCEPYQYRLPANQPNHTCGGANIWADVDNSEEVFCPAGSYCPSTTKKIPCSNGNYCRMGSTSEKRCYNLVPCKSGTESQNLHVYGIMFIVGLSTLLLVIYSCSDQVLSIRERRLAKSRDAAARSVKSSAQARRRWKDAKDSVTRHASRLQSHLSFSFSHQKNIAHSEELQILNQVIPEADGDLLSPLPPNASRATLDSRNQIETGHEIENESIVHDEFDMEDGHRVVTANSSKGKKLHARSKIFRHAYSQLEKEKARQQEYKNLTFSGVISMASNSEQRKRPLIEISFKDLSLILKSQNKYILRCVTGNIKPGHITAVMGPSGAGKTTFLSALAGKALGCKKSGLILINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSANCRLSAESSKADKVVVVERVIEFLGLHSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNVCMVVHQPSHTLFKMFDDLVLLAKGGLTVYHGPVNRVEEYFAGLGIFIPERINPPDYFIDILEGVIKPSGRSGVKYDELAVRWMLHNGYSVPPDMQKSNMPSRLLNPINETNNDDAVNEEPSFTGELWKDVKGNIEMHQEKLRLNFLKSKDLSNRRTASLFWQYKYFLARVAKQRLRDAKAQAIDYLILLLAGACLGSVIKMRDQSLGAAGYTYTVIAVSLLCKIAALRSFSLEKLQYWRESASGMSSLAYFLSRDTIDHFNTVIKPAVYLSMFFFFTNPRSTFVDNYTVLLCLVYCVTGMGYALAIVFEPGAAQLWSVLLPVVLTLVATQPRDSEFMKRISDVCYTKWALQAFVIANAERYDKVWLITRCGALKTNDYNLSDWSLCISILILFGVVSRAIAFICMLTFRRK 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1844g00008 1094 Pfam ABC transporter 510 659 IPR003439 GO:0005524
Pral1844g00008 1094 Pfam ABC-2 type transporter 688 1094 IPR043926 GO:0140359
Pral1844g00008 1094 Gene3D - 477 725 IPR027417 -
Pral1844g00008 1094 ProSitePatterns ABC transporters family signature. 631 645 IPR017871 GO:0005524|GO:0016887
Pral1844g00008 1094 SMART AAA_5 516 708 IPR003593 GO:0016887
Pral1844g00008 1094 FunFam ABC transporter G family member 24 484 726 - -
Pral1844g00008 1094 MobiDBLite consensus disorder prediction 324 343 - -
Pral1844g00008 1094 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 241 1083 - -
Pral1844g00008 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 723 IPR027417 -
Pral1844g00008 1094 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 490 731 IPR003439 GO:0005524
Pral1844g00008 1094 CDD ABCG_EPDR 488 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1844g00008 Pral-Chr1844 59030 67940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1844g00008 487 710 Calmodulin-binding Proteins AT2G36910 27.511 2.90e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1844g00008 - - qsa:O6P43_005018 1538.09