Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1844g00007 ATGCTTTGGTCATGGTTAGCCATTGTGGTTTTGACTCTGAGCTCCTTGAATTTGGTCCAGTGCCAAGTTAACAGTGGCCCCAATCCATTCGGTGATTCTTCTGGTGCTCTTCCCTTTATGACACAGCTTGTGAATGCCCAACTCTCCAATCTTACTAGAGATCTCAGCAAGGAAATCAAAAGCCAGTCCAGCTTCTGCGTCAAAGACCCGGAAGCTGAGTGGAACAAGGCATTTAACTTTTCATCCGATTTAAGCTTCTTGACTTCTTGCATTCAGAAAACTCAAGATATTACACGACGTTTCTGCACGGTAGCAGAAGTGAAGTCTTATTTTAGAAGTATAACTGAAAAAATTGGAAGCACCAGTTACTTGAAGCCTAACAGGAATTGCAATTTAACTTCATGGGGCTCTGGGTGTGAGCCTGGATGGGCGTGTAGTACTGACCCAGATCAGCAGGTTGACCTTAGAACTTCACAGGATATCCCAGCAAGAACTACAAGCTGCCAGGCATGTTGTGAGGGTTTCTTCTGTCCCCAGGGTCTTACCTGCATGATACCTTGTCCATTGGGTTCCTATTGTCCCCTAGCAACACTGAATCGAACAAGTGGTTTATGTGAACCATATCAGTACCGGCTACCAGCAAACCAGCCAAACCATACATGTGGAGGAGCAAATATTTGGGCTGATGTTGATAACAGTGAAGAAGTATTTTGTCCAGCAGGATCCTATTGTCCATCAACCACCAAAAAAATCCCTTGCAGTAATGGAAATTACTGCAGGATGGGGTCCACATCTGAGAAACGCTGCTACAATTTGGTGCCATGTAAGTCGGGCACTGAAAGTCAGAACCTTCATGTATATGGAATCATGTTCATAGTTGGTTTGAGTACTTTGCTACTTGTTATTTACAGCTGCTCTGATCAAGTACTCTCAATTAGGGAAAGAAGGCTAGCCAAATCAAGAGATGCAGCTGCTAGAAGTGTAAAGAGCTCAGCACAAGCACGTAGAAGGTGGAAAGATGCTAAAGATTCCGTTACGAGGCATGCTAGCAGGCTTCAATCTCATTTGTCTTTCTCATTTTCACATCAAAAGAATATAGCTCACTCCGAAGAACTTCAGATTTTAAATCAAGTGATCCCTGAGGCAGATGGTGACTTGTTATCACCCTTACCTCCGAACGCTTCAAGGGCAACTTTGGATTCCAGAAATCAGATAGAAACTGGGCATGAAATTGAAAATGAATCTATTGTCCATGATGAGTTTGATATGGAAGATGGACATCGGGTTGTCACTGCAAATAGTTCCAAGGGTAAAAAACTACATGCCCGTAGCAAGATATTCAGGCATGCGTATTCTCAGCTTGAGAAAGAGAAGGCTCGGCAACAAGAATACAAGAACCTTACCTTCTCAGGAGTAATTAGCATGGCCTCCAACAGTGAACAAAGAAAAAGACCTCTTATTGAGATTTCATTCAAAGATCTGAGTCTTATTTTAAAATCACAAAACAAGTATATACTGCGATGTGTTACTGGCAATATAAAACCAGGTCATATTACTGCTGTCATGGGTCCTTCAGGAGCTGGTAAAACAACATTTCTTTCAGCACTTGCAGGAAAAGCACTTGGATGCAAGAAGAGTGGTTTAATATTAATAAATGGAAAGAATGAATCAATTCACTCTTATAAGAAAATTATCGGTTTTGTGCCCCAAGATGATATCGTTCATGGAAACCTGACAGTGGAAGAAAATCTCTGGTTCAGTGCAAATTGCAGGCTCTCTGCTGAATCTTCAAAAGCGGATAAAGTAGTGGTTGTTGAAAGAGTTATTGAATTCTTGGGACTTCACTCTGTGCGAAATTCCCTCGTTGGAACAGTAGAAAAGCGAGGGATATCTGGAGGCCAAAGGAAGCGAGTGAATGTTGGATTGGAAATGGTTATGGAACCCTCATTACTAATCCTGGATGAACCCACATCAGGCTTGGATAGTGCATCATCTCAGTTACTTCTTAGAGCACTTCGACGTGAAGCTCTTGAAGGGGTGAATGTCTGCATGGTAGTTCATCAACCTAGCCATACATTATTCAAGATGTTTGATGATCTGGTACTCCTGGCAAAAGGCGGTCTTACTGTCTACCATGGACCTGTTAATAGGGTTGAAGAATACTTTGCAGGCCTTGGGATCTTTATCCCTGAGCGCATTAACCCTCCGGACTACTTTATTGACATTTTGGAGGGAGTGATAAAACCTAGTGGACGCTCAGGAGTGAAGTATGATGAGCTCGCAGTTAGATGGATGCTTCATAATGGTTACTCAGTGCCTCCTGATATGCAAAAAAGTAACATGCCATCCAGGCTTCTAAATCCAATTAATGAAACAAATAATGATGATGCTGTTAATGAGGAACCATCCTTCACTGGAGAGTTATGGAAAGATGTCAAAGGTAACATAGAGATGCATCAAGAGAAGTTAAGGCTAAACTTTTTAAAGTCCAAGGATTTATCAAATCGGAGAACTGCTAGTCTGTTCTGGCAATATAAGTACTTCCTTGCTAGAGTTGCTAAGCAGCGACTTAGGGATGCCAAAGCGCAAGCCATAGACTATCTGATTTTATTACTTGCTGGAGCCTGCCTAGGATCAGTTATCAAAATGAGGGATCAATCGCTTGGTGCAGCAGGATACACATACACAGTGATTGCTGTTTCTCTTCTCTGCAAAATAGCAGCTTTGAGATCATTTTCTCTGGAGAAATTACAATACTGGAGGGAGAGTGCTTCAGGCATGAGCAGCCTAGCTTATTTTCTCTCTAGGGACACAATTGACCATTTTAATACAGTGATCAAGCCCGCCGTGTATCTATCTATGTTCTTTTTCTTCACTAACCCGAGGTCTACTTTTGTTGATAATTACACTGTGCTCCTCTGCCTTGTGTACTGTGTGACTGGCATGGGGTATGCACTGGCCATTGTCTTTGAACCTGGAGCTGCTCAATTGTGGTCAGTGCTTCTCCCAGTTGTTTTGACTCTAGTCGCCACGCAACCGAGAGACAGTGAATTTATGAAACGCATATCTGACGTGTGCTACACCAAATGGGCTCTGCAGGCATTTGTAATCGCTAATGCTGAAAGGTATGATAAAGTGTGGCTCATAACTCGTTGTGGTGCCCTTAAGACAAATGATTACAATCTTTCAGATTGGAGTTTGTGCATCTCAATACTTATCCTCTTTGGAGTAGTGAGTCGTGCGATTGCATTCATCTGTATGTTAACCTTTAGAAGGAAGTAA 3282 0.4232 MLWSWLAIVVLTLSSLNLVQCQVNSGPNPFGDSSGALPFMTQLVNAQLSNLTRDLSKEIKSQSSFCVKDPEAEWNKAFNFSSDLSFLTSCIQKTQDITRRFCTVAEVKSYFRSITEKIGSTSYLKPNRNCNLTSWGSGCEPGWACSTDPDQQVDLRTSQDIPARTTSCQACCEGFFCPQGLTCMIPCPLGSYCPLATLNRTSGLCEPYQYRLPANQPNHTCGGANIWADVDNSEEVFCPAGSYCPSTTKKIPCSNGNYCRMGSTSEKRCYNLVPCKSGTESQNLHVYGIMFIVGLSTLLLVIYSCSDQVLSIRERRLAKSRDAAARSVKSSAQARRRWKDAKDSVTRHASRLQSHLSFSFSHQKNIAHSEELQILNQVIPEADGDLLSPLPPNASRATLDSRNQIETGHEIENESIVHDEFDMEDGHRVVTANSSKGKKLHARSKIFRHAYSQLEKEKARQQEYKNLTFSGVISMASNSEQRKRPLIEISFKDLSLILKSQNKYILRCVTGNIKPGHITAVMGPSGAGKTTFLSALAGKALGCKKSGLILINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSANCRLSAESSKADKVVVVERVIEFLGLHSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNVCMVVHQPSHTLFKMFDDLVLLAKGGLTVYHGPVNRVEEYFAGLGIFIPERINPPDYFIDILEGVIKPSGRSGVKYDELAVRWMLHNGYSVPPDMQKSNMPSRLLNPINETNNDDAVNEEPSFTGELWKDVKGNIEMHQEKLRLNFLKSKDLSNRRTASLFWQYKYFLARVAKQRLRDAKAQAIDYLILLLAGACLGSVIKMRDQSLGAAGYTYTVIAVSLLCKIAALRSFSLEKLQYWRESASGMSSLAYFLSRDTIDHFNTVIKPAVYLSMFFFFTNPRSTFVDNYTVLLCLVYCVTGMGYALAIVFEPGAAQLWSVLLPVVLTLVATQPRDSEFMKRISDVCYTKWALQAFVIANAERYDKVWLITRCGALKTNDYNLSDWSLCISILILFGVVSRAIAFICMLTFRRK 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1844g00007 1093 Pfam ABC-2 type transporter 687 1093 IPR043926 GO:0140359
Pral1844g00007 1093 Pfam ABC transporter 509 658 IPR003439 GO:0005524
Pral1844g00007 1093 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 489 730 IPR003439 GO:0005524
Pral1844g00007 1093 MobiDBLite consensus disorder prediction 323 342 - -
Pral1844g00007 1093 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 240 1082 - -
Pral1844g00007 1093 SMART AAA_5 515 707 IPR003593 GO:0016887
Pral1844g00007 1093 CDD ABCG_EPDR 487 713 - -
Pral1844g00007 1093 ProSitePatterns ABC transporters family signature. 630 644 IPR017871 GO:0005524|GO:0016887
Pral1844g00007 1093 Gene3D - 476 724 IPR027417 -
Pral1844g00007 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 722 IPR027417 -
Pral1844g00007 1093 FunFam ABC transporter G family member 24 483 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1844g00007 Pral-Chr1844 59030 67940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1844g00007 486 709 Calmodulin-binding Proteins AT2G36910 27.511 3.38e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1844g00007 - - qsa:O6P43_005018 1531.15