Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1844g00006 ATGTGCGAACCTAGAACGAGCTCGAAGAAATTGTTGGCAATATTCATTTGGTTCGGCATTGCGTCGCCCTTGAGCTTCTTCAATGTGATAGATTGCCAAGACGTCGCCGTCGATGACTACGATCAAATCCACAATCCTGCAGTTCTTCCCCTCGTGACGCAGCTTGTGTACTCTCGAATTTCCAATCTCACTTCCCTTCTCAGTCATGAAATCGGCCATCGTGCTAGTTTCTGCGTCAAAGATCCGGAGACTGAGTGGAACCAAGCATTTAACTTCTCTTCAAATTTGGACTTCCTGAGTTCTTGCATTCGAAAAACCAAAGGTGATATCACAAAACGCTTGTGTACTGCAGCAGAGATGAGGTTTTACTTTAATGGTTTCTTTGAAAGTTCAAGAAGCGCCGATTTCCTAAAGCCTAACCAGAACTGCAATTTAACCTCATGGGTCTCTGGCTGCGAGCCAGGATGGGCCTGTAGTGTTGGCCCACAACAGAATGTTGACCTTCAGAATTCAAAGGAGATGCCCGCAAGAACTACAAATTGTCAAGCCTGTTGTGAGGGCTTCTTTTGTCCTCAAGGCCTCACTTGCATGATACCTTGCCCGCTAGGTTCCCATTGCCCTCTTGCGAGACTCAATGAAACAACTGGTGTATGTGAACCATATCTTTACCAGTTGCCTCCAAATCAGCCGAACCATACATGCGGAGGAGCAAATGTTTGGGCCGATTTTAGTAGCAGTATGAGCATATTTTGTTCTGCTGGATCATACTGCCCAACAACCACCAAAAAAGTTCCTTGCGGTAGTGGACATTATTGTAGGATGGGTTCGACATCTGAGAAAAAATGCTTCAAGTTGAGTTCATGTAATTCAAAAACAGCAACGCAAAACCTGCATGCATATGGAATTATGCTCATTGCCGCTTTGAGTACATTGCTACTCATTATTTACAACTTTTCTGACCAAGTTCTCACAACAAAGGAAAGGCGAGTGGCTGAATCCAGAGAAGCAGCTGCTAGAAGTGCAAGGAACACTGCAAATGCACGCCAAAGATGGCATTCTGCAAAAGATGCTGCTAAGAAGCGTGCAAGCGAGCTGCAAGCCCAACTGTCACGCACATTTTCTCGTAATAAAAAGGAAGCATCACATTCAGGAAAACTTCAAATTTTGGATCAGGAAACTTCGGAAACAGACGTTGAATTATTGCCAGCTCTTTCTATCACTTCATGCTTGGATGTTCCTTCATCTGCAGTGCCAAATGAAATGAGAAAAGAACCCAGCGACCTGATGCAGATGGTGCATGAGATAGAAAATGACCCAGACATTGATGAAAACTTCAGTGTCGAAAGTAAAGAAAGAAGTTTCAAGCGGAAAATGCCCAAGGTGAAACAATTGAATACTCATGCCCAGATTTTTAAGTATGCATATGCTCAACTTGAAAAGGAGAAGGCGCAGCAACAAGAAAACAAGAATCTTACCTTCTCAGGGGTCATTAGAATGGCTATCAACAGTGAACCGAGAAAAAGGCCATTAATCGAGATTTCTTTCAAAGATCTGACTCTCACTTTGAAATCACAAAGAAAGCATATATTGAGATGCGTTACAGGTAAAATAAAACCTGGACGCATTACTGCTGTCATGGGTCCTTCAGGTGCAGGTAAGACAACATTTCTTTCAGCTCTAGCCGGGAAAGCACATGGTTGCACAGCAACTGGTTCTATTCTCATAAATGGAAAGAATGAATCCATCCACTCCTACAAGAAAATTATTGGCTTTGTGCCACAAGATGATGTAGTTCACGGAAACCTTACAGTGGAGGAGAACCTTTGGTTCAGTGCACAGTGCAGGCTATCCTCTGACTTGTCTAGACCGGATAAAGTTCTAGTTGTCGAGAGAGTTATTGAATTCCTGGGACTTCAGTCAGTGCGAAATTCCTTGGTTGGGACTGTTGAAAAGCGAGGAATCTCAGGAGGCCAAAGGAAACGTGTAAATGTTGGGTTGGAGATGGTCATGGAACCTTCACTTTTGATCTTGGATGAACCCACATCCGGTTTGGACAGTGCATCGTCTCAACTCCTTCTTAGAGCACTTAGACGTGAATCTCTCGAGGGAGTGAACATTTGCATGGTCGTGCACCAACCCAGCTATGCCTTGTTCAAGATGTTTGATGATTTAATTCTTCTGGCAAAAGGTGGTCTTACTGTCTATCATGGATCAGTCAAGAAGATTGAAGAGTACTTCGCGGGTTTTGGGATCAATATCCCAGAAAGGATCAACCCTCCAGACTACTTTATTGACATTCTGGAGGGTATGTCAGTACCTGGTGGAAGCTCAGGTGTGAGCTATAGAGAGCTTCCAATTAAATGGATGCTTTATAATAACTACCCAGTGCCTTTTGATATGCAGCAGGGTGTATCTAAAATTGATGTATCACCTCAAAGTGTAAACACAGCTACTGAAATGGATCCTCATGGTTCTGGCCATCAACAAACGTTTGCTGGAGAATTATGGCAAGATGTTAAACACAATGTGGAACTGCAGGGCGAGAAGATTAGACTTAATTATTCCAAATCCAAGGATTTATCCAACAGGAAAACTCCTGGAGTGTTTATGCAATATAAGTACTTCCTAATAAGGGTTGGTAAGCAGAGACTACGGGAAGCTAGGATTCAGGCTATAGATTACCTGATCTTGTTACTTGCCGGAGCTTGCTTAGGATTGCTTACAAAATCGAGTGAACAAACGTTTGGTGCAGTTGGGTACACATACACGGTCATTGCTGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGATCCTTTTCTCTGGATAAAATACAATACTGGAGGGAGAGGGATTCCGGCATGAGCAGCTTGGCTTATTTTCTGTCAAAGGACACAGTTGATCACTTTAATACAGTGGTCAAGCCTCTGGTGTACCTCTCCATGTTCTATTTTCTCACCAATCCAAGATCTTCTTTTGCAGATAACTACATTGTGCTTCTCTGTCTTGTATACTGTGTGACTGGCATAGCTTATGCATTGGCCATGTTCTTTGAACCTGGTGCCGCCCAGCTTTGGTCAGTACTTCTTCCAGTTGTTTTGACTCTCATTGCAACAAAACAAAGAGATAATGACTTTCTGAAGGGTATAGCTAATGTCTGCTATCCTAAGTGGGCTCTGCAAGCATTTGTGATTGCAAATGCTGAGAGGTATCATGGAGTATGGCTCATAACTCGATGTGGATCACTTAAGGAAAGTGGCTATAATCTTCATGATTGGAATTTGTGCGTATTAATCCTCATTTGCATAGGCATAATTAGTCGAGTTCTAGCATTTTTTAGTATGATCACTTTCCAAAAGAAATGA 3363 0.4282 MCEPRTSSKKLLAIFIWFGIASPLSFFNVIDCQDVAVDDYDQIHNPAVLPLVTQLVYSRISNLTSLLSHEIGHRASFCVKDPETEWNQAFNFSSNLDFLSSCIRKTKGDITKRLCTAAEMRFYFNGFFESSRSADFLKPNQNCNLTSWVSGCEPGWACSVGPQQNVDLQNSKEMPARTTNCQACCEGFFCPQGLTCMIPCPLGSHCPLARLNETTGVCEPYLYQLPPNQPNHTCGGANVWADFSSSMSIFCSAGSYCPTTTKKVPCGSGHYCRMGSTSEKKCFKLSSCNSKTATQNLHAYGIMLIAALSTLLLIIYNFSDQVLTTKERRVAESREAAARSARNTANARQRWHSAKDAAKKRASELQAQLSRTFSRNKKEASHSGKLQILDQETSETDVELLPALSITSCLDVPSSAVPNEMRKEPSDLMQMVHEIENDPDIDENFSVESKERSFKRKMPKVKQLNTHAQIFKYAYAQLEKEKAQQQENKNLTFSGVIRMAINSEPRKRPLIEISFKDLTLTLKSQRKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAHGCTATGSILINGKNESIHSYKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSSDLSRPDKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRRESLEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGSVKKIEEYFAGFGINIPERINPPDYFIDILEGMSVPGGSSGVSYRELPIKWMLYNNYPVPFDMQQGVSKIDVSPQSVNTATEMDPHGSGHQQTFAGELWQDVKHNVELQGEKIRLNYSKSKDLSNRKTPGVFMQYKYFLIRVGKQRLREARIQAIDYLILLLAGACLGLLTKSSEQTFGAVGYTYTVIAVSLLCKIAALRSFSLDKIQYWRERDSGMSSLAYFLSKDTVDHFNTVVKPLVYLSMFYFLTNPRSSFADNYIVLLCLVYCVTGIAYALAMFFEPGAAQLWSVLLPVVLTLIATKQRDNDFLKGIANVCYPKWALQAFVIANAERYHGVWLITRCGSLKESGYNLHDWNLCVLILICIGIISRVLAFFSMITFQKK 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1844g00006 1120 FunFam ABC transporter G family member 24 507 749 - -
Pral1844g00006 1120 MobiDBLite consensus disorder prediction 334 361 - -
Pral1844g00006 1120 Gene3D - 511 747 IPR027417 -
Pral1844g00006 1120 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 253 1108 - -
Pral1844g00006 1120 SMART AAA_5 539 731 IPR003593 GO:0016887
Pral1844g00006 1120 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 513 755 IPR003439 GO:0005524
Pral1844g00006 1120 CDD ABCG_EPDR 511 737 - -
Pral1844g00006 1120 ProSitePatterns ABC transporters family signature. 654 668 IPR017871 GO:0005524|GO:0016887
Pral1844g00006 1120 Pfam ABC transporter 532 682 IPR003439 GO:0005524
Pral1844g00006 1120 Coils Coil 468 488 - -
Pral1844g00006 1120 Pfam ABC-2 type transporter 711 1120 IPR043926 GO:0140359
Pral1844g00006 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 735 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1844g00006 Pral-Chr1844 47224 57386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1844g00006 537 743 Calmodulin-binding Proteins AT2G36910 26.407 5.94e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1844g00006 - - gmx:100775464 1674.83