Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1844g00005 ATGTGCAGATCCAAAAGCAGCACAAAAGTGATCGAACCCAGCAGACCCCGTCGATCTCGTACCTCCCAATCTTCTTCCTCTTCGCCTCGCACCACCGCCAATAATCTCCGTCCTAATTCTTCTTCCTTCAATCTCACCACAGAATCTACTAGCTACTATTACAAGGATTGGTCTAAAGCCTCCTCCGTTTCAAGTGGGTCCTCCCTTTCGAGCCTCAAGGACTCTTTGCCTGAGAACGCTCATATCTATCAGTTCTCTGAGATTTCCTCCGCCACCCGACATTTTAAGCTCGAAAAATACTCCTCGTCCTCTTCTTCTTCGTCTTGGCGATGCTCCATTCACAACAAGGATGTTCTGGTTTTCCAGCGCAAGTTTCGCCGTCCCATGGAATTGCCGGAGCTCCGAGATCGGCTTGCTGTGATTTGCCGGAGCCATCATAGTAGCTTGATTAAACTTCTCGGGGCATCGGTCTCCGGTAATTATATTTATCTTGTGTATGAGTATGTTCGTGGTGTGAATCTCGCTGATTGTCTTCGAAATCGTTTGAATCCCAGCTTCACTGATCTGTCGACGTGGCTTTCTCGGATGCAAATCGCGACTGATCTTGCCCACGGTCTTGATTACATTCACCATTTTTCCGGCCTGAACTCGAATTTCGTCCACAACCACATCAAGAGCTCGAGTATCGTCATCACGGAGGACACTCTGAATGCGAGGATTTGCCATTTTGGTACCTCGGAATTGTGCGGTGAAATCGTCACCGCCGACACACCGTCCAGTTCCAATTCTACGAAATTGAAGGAGCTGCAGAGGTCCGGTAGCCGGACAGTGAGGTTGGAAGGGACGAGAGGGTATATGGCGCCGGAGTATCTGGCAACGGGGGTTGCGACGCAGAAATCGGATGTGTACGCCTTTGGAGTCGTGGTTTTGGAGCTCCTCAGCGGGCAAGAGGCGTTGAAGTACGAATTCGACGACAACGGTGGATTCACAAGGGTGAGTGTGGTGGAGACGGCGAGGTTAGCTATGGCGGAAGAAGGTGGACCGAGGAAGTGGGTGGACAAGAGGCTGAAGGATTCGTTTCCAGTGGAAGTGGCGGCTGAGATGATTCGGGTCGGGTTGGATTGCCTGGATGAGGATCCAAACGAGAGGCCGGATATGGGTCGGGTCGCGCTTTCGGTGTCGAAGCTGTATTTGGATTCGAAGAAGTGGGCCGAGAATATGGGAACGGCTATTGACTTGACCGTCTCACTAGGGCCTCGGTGA 1263 0.5154 MCRSKSSTKVIEPSRPRRSRTSQSSSSSPRTTANNLRPNSSSFNLTTESTSYYYKDWSKASSVSSGSSLSSLKDSLPENAHIYQFSEISSATRHFKLEKYSSSSSSSSWRCSIHNKDVLVFQRKFRRPMELPELRDRLAVICRSHHSSLIKLLGASVSGNYIYLVYEYVRGVNLADCLRNRLNPSFTDLSTWLSRMQIATDLAHGLDYIHHFSGLNSNFVHNHIKSSSIVITEDTLNARICHFGTSELCGEIVTADTPSSSNSTKLKELQRSGSRTVRLEGTRGYMAPEYLATGVATQKSDVYAFGVVVLELLSGQEALKYEFDDNGGFTRVSVVETARLAMAEEGGPRKWVDKRLKDSFPVEVAAEMIRVGLDCLDEDPNERPDMGRVALSVSKLYLDSKKWAENMGTAIDLTVSLGPR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1844g00005 420 MobiDBLite consensus disorder prediction 1 42 - -
Pral1844g00005 420 MobiDBLite consensus disorder prediction 17 42 - -
Pral1844g00005 420 Gene3D Transferase(Phosphotransferase) domain 1 171 412 - -
Pral1844g00005 420 SUPERFAMILY Protein kinase-like (PK-like) 125 393 IPR011009 -
Pral1844g00005 420 Pfam Protein kinase domain 137 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1844g00005 420 PANTHER OS09G0572100 PROTEIN 1 420 - -
Pral1844g00005 420 Gene3D Phosphorylase Kinase; domain 1 56 168 - -
Pral1844g00005 420 ProSiteProfiles Protein kinase domain profile. 57 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1844g00005 Pral-Chr1844 44291 46096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1844g00005 78 403 Receptor kinase-like Gene Family AT1G51940 30.838 1.99e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral1844g00005 Pkinase 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1844g00005 - - qsa:O6P43_008679 558.525