Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1844g00001 ATGTTGCCTCACACAGCCACAAGAGCCGCTATGCTGGTCAGAATCAACACTCTTCTTCAAGGATACTCCGGCATCAGATTTGAGATCTTGGAAGCCATGACCAAGTTCCTTAACCACAACATAACTCCATGCCTTCCTCTCAGGGGCACCATCACTGCTTCAGGGGACCTCGTACCTCTGTCTTACGTTGCCGGCCTCTTGATCGGCCGACCCAACTCCAAATCCATAGGTCCTGACGGTAAAGTCCTCTCTCCTAAAGAAGCCTTTCAATTCGCAGGAATCAGTGGAGGTTTCTTTGAACTGCAGCCCAAAGAGGGCTTGGCTCTTGTTAATGGTACTGCCGTAGGATCTGCTTTAGCCTCCATGGTTCTTTTCGAGGCAAACATTCTGGGTGTCCTGTCGGAAGTCTTGTCTGCAATTTTCGCCGAGGTTATGCAGGGCAAGCCAGAGTTTACTGACCACTTGACACATAAATTGAAACACCATCCTGGCCAAATTGAGGCCGCTGCTATAATGGAACACATTTTAGATGGAAGCTCTTATGTTAAGGCAGCTCAGCAGCTCCATGAGATTGATCCTCTTCAGAAGCCTAAACAAGACAGGTATGCTCTGAGAACTTCTCCTCAGTGGCTTGGACCGCAGATTGAAGTGATCAGACAAGCGACAAAGATGATCGAGAGAGAGATCAACTCTGTGAATGACAATCCATTGATTGATGTTTCAAGGAGCAAGGCACTTCATGGAGGAAACTTCCAGGGTACCCCAATTGGCGTTTCAATGGACAACACTCGCCTGGCCCTTGCTTCCATTGGAAAGCTCATGTTTGCCCAATTCTCTGAGCTTGTCAATGACTTTTACAACAATGGGTTGCCTTCAAACCTCTCTGCTAGCCGACACCCGAGCTTGGATTATGGCTTCAAGGGAGCTGAAATCGCCATGGCTTCATACTGTTCAGAGCTTCAATTCCTTGCCAATCCTGTCACAAACCATGTTCAGAGCGCAGAGCAACACAACCAAGACGTGAACTCTTTAGGGCTAATTTCCTCAAGAAAAACAGCTGAAGCTGTGGACATACTGAAGCTCATGTCCTCCACCTTCTTAATTGCACTATGCCAAGCCATAGATCTGAGGCATTTGGAAGAGAACTTAAAGAGCACTGTGAAGAACACTGTGAACCAAGCGGCCAAGAAAGTCCTAACAATGGGTGTCAATGGAGAATTACTCCCTTCAAGATTCTGCGAAAAGGATTTACTCACAGTGGTGGACCGTGAGCATGTGTTTGCTTACATTGATGATCCTTGCAGCGCAACATACCCATTAATGCAGAAACTGAGACAAGTTCTGGTTGATCATGCACTGCAAAATGGTGACAGAGAAAAGGACTCAAGCACCTCCATTTTCTCGAAGATTGCAGCTTTTGAGGAAGAACTCAGGATCCATTTGCCCGGAGAAGTAGAAAATGCAAGAATTGAGGTCGAGAATGGAAAATGTGCCATCCCTAACAGGATCAAAGAATGCAGGTCTTATCCACTGTACAGATTTGTGAGAGAAGAACTTGGTACTGGTTTGCTAACAGGTGAGAAAGTGAGGTCACCTGGTGAAGAATTTGACACGGTCTTCACCGCGATGTGTGCAGGAAAGTTGATTGATCCTTTATTGGAGTGCCTCAAGGAGTGGAATGGGGCTCCTCTGCCAATATGTTAG 1704 0.4671 MLPHTATRAAMLVRINTLLQGYSGIRFEILEAMTKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPDGKVLSPKEAFQFAGISGGFFELQPKEGLALVNGTAVGSALASMVLFEANILGVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQQLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKMIEREINSVNDNPLIDVSRSKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRHPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLIALCQAIDLRHLEENLKSTVKNTVNQAAKKVLTMGVNGELLPSRFCEKDLLTVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALQNGDREKDSSTSIFSKIAAFEEELRIHLPGEVENARIEVENGKCAIPNRIKECRSYPLYRFVREELGTGLLTGEKVRSPGEEFDTVFTAMCAGKLIDPLLECLKEWNGAPLPIC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1844g00001 567 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 49 65 IPR022313 GO:0016841
Pral1844g00001 567 FunFam Phenylalanine ammonia-lyase 114 419 - -
Pral1844g00001 567 Gene3D Fumarase/aspartase (Central domain) 114 562 - -
Pral1844g00001 567 FunFam Phenylalanine ammonia-lyase 380 501 - -
Pral1844g00001 567 Gene3D - 380 501 IPR023144 -
Pral1844g00001 567 Gene3D - 1 113 IPR024083 -
Pral1844g00001 567 PANTHER HISTIDINE AMMONIA-LYASE 2 567 IPR001106 -
Pral1844g00001 567 SUPERFAMILY L-aspartase-like 2 567 IPR008948 GO:0003824
Pral1844g00001 567 NCBIfam phenylalanine ammonia-lyase 2 557 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pral1844g00001 567 CDD PAL-HAL 2 377 IPR001106 -
Pral1844g00001 567 Pfam Aromatic amino acid lyase 2 386 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1844g00001 Pral-Chr1844 271 2122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1844g00001 2 567 Monolignol Biosynthesis Gene Families AT3G53260 84.276 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1844g00001 K10775 - rcu:8273543 1018.45