Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1843g00003 ATGAGCGTGGTCGGTTTTGATTTTGGTAATGAGAGCTGTATTGTTGCTGTTGCGAGGCAGAGAGGGATTGATGTTGTGCTCAATGATGAGTCCAAACGAGAAACTCCAGCAGTTGTCTGTTTTGGTGACAAACAACGGTTTATTGGAACAGCTGGGGCTGCATCTACAATGATGAACCCAAAGAATTCAATTTCACAGATCAAGCGACTAATTGGTAGACAATTCTCTGATCCAGAGTTGCAGCGGGATCTGAAGTCATTGCCTTTTGTGGTAACTGAAGGGCCTGATGGCTATCCATTAATTCATGCACGGTATTTGGGTGAAAATAAAACGTTTACACCAACACAAGTGTTGGGAATGGTGTTGTCAAATCTCAAAGGCATAGCTGAGAAGAATCTGAATGCAGCTGTTGTTGACTGTTGCATTGGAATTCCGGTTTATTTCACTGATCTTCAGAGAAGGGAAGTCTTGGATGCAGCTACCATTGCTGGTTTGCACCCACTTCGCCTGATTCATGAAACAACAGCGACTGCCTTGGCATATGGAATTTATAAGACAGATCTCCCTGAAAATGATCAGCTAAATGTTGCATTTGTAGATGTTGGACATGCCAGCATGCAAGTGTGCATTGCTGGCTTTAAGAAGGGGCAGCTGAAAGTACTGGCTCATTCGTTTGATAGATCTCTAGGTGGTAGGGATTTTGATGAAGTTTTATTCCATCACTTTGCCGCCAAGTTCAAGGAAGAGTACAAGATTGATGTTTTCCAGAACGCCAGGGCTTGTCTAAGGCTGAGAGCTGCTTGTGAGAAGCTGAAGAAGGTTCTTAGTGCGAATCCTGGAGCACCTCTTAACATTGAATGCTTAATGGACGAGAAAGATGTCAGGGGCTTCATTAAGCGTGATGAATTTGAGCAATTAAGTGTGCCAATATTGGAACGTGTTAAAAAACCTTTGGAGAAAGCTCTTGCAGAAGCAGGTCTGACGGCTGAGAATGTACATGTGGTTGAGGTAATTGGTTCAGCTTCTCGTGTACCAGCTATAAACAAGATACTGACAGAGTTTTTCAAGAAGGAGCCTAGGCGGACAATGAATGCAAGTGAGTGTGTTGCCAAGGGTTGCGCCTTGCAATGTGCTATTCTTAGTCCGACATTTAAAGTACGGGAGTTTCAGGTCAATGAAAGCTTTCCTTTCCCAATTTCTGTGTCTTGGAAAGGTTCTGGTCCAGATCTACAGGAGAGTGGACCAGATAATCAGATGAGTACTGTTGTATTCGCTAAAGGAAATGTCATACCAAGCATCAAGGCTCTGACATTCTATAGGCGGGAAACATTTTCTATTGATGTACAGTATGCTGATGTGAGTGAGCTGCAGACACCTCCAAAGATCAGCACATATACTATTGGTCCTTTGCCAACTACAAAAGTTGAGAAGGCAAAAATTAAAGTCAAAGTACGATTGAATCTGCATGGAATTGTATCTGTTGAGTCGGCAACTCTCCTAGAGGAAGAGGAAGTTGAGGTTCCAGTGGTCAAAGTACCAGCCGAAGAAAGTGCCAAGATGGACACTGATGAAGCTCCTGCTGAGGCTGCAACAGAGGAGGCGGCTGCTGCGGCTGAGGCCGCTGCAGCACCTCCAAGTTCCAGTGATGGCGATGTTGATATGCAAGATGCCAAGGCAACTGTTGACGTCCCTGGGGTGGAAAATGGTAAAGCTGAGACTGTGGATAAGCCTGTGCAGATGGATACTAATGCTAAGGCTGAGGCTCCAAAGAAAAAGGTCAGGAAAACAAGCATACATGTGACAGAGTTGGTATATGGAGTGATGAGTCGTTCTGATGTCCAGAAAGCTGTAGAGAAAGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAAGAAACAAAAGAAAAGAAGAATGCTGTTGAGGCTTATGTTTATGACATGAGGAACAAGCTCAGTGACAAATACCATGAGTTTGTCACTGATTCAGAGAGAGAGGCATTTACTGCTAGACTTCAGGAGGTGGAAGACTGGTTATATGAAGAAGGGGAGGATGAAAGTAAAGGTGTTTATGTTGCCAAACTTGAGGAACTTAAGAAGCAAGGTGATCCTATTGAAGAACGGTACAAGGAATACATGGAGAGGGGCACAGTAATCAATCAGTTGGTCTATTGTATAACTAGCTACAGGGAAGCTGCAATGTCAAACGATCCCAAATTTGATCACATTGACATCTCTGAGAAACAGAAGGTCCTGAATGAATGTGTCGAAGCTGAGGCTTGGCTTAGGGAGAAGCATCAGCAGCAGGACTCTCTTCCAAAATATGCTACCCCTGTACTCTTCTCAGCTGAACTAAGAAAGAAAGCTGAGGCAGTCGATAGGTTCTGTAAGCCAATTATGACAAAACCAAGGCCAGCCAAGCCGGCTACTCCTGAAGCGACAGCAACACCACCGCCTCCTCAGGGTGACGAGCAGCAGCAACCTCTGGGAGATGATAATGCAGGTGACAACGCAGAGCAGGCCCCACCAACGTCTACTGAACCAATGGAGGCTGACAAGTCAGAAAATTCAGGCGCTGCATAA 2580 0.4481 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPFVVTEGPDGYPLIHARYLGENKTFTPTQVLGMVLSNLKGIAEKNLNAAVVDCCIGIPVYFTDLQRREVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPGAPLNIECLMDEKDVRGFIKRDEFEQLSVPILERVKKPLEKALAEAGLTAENVHVVEVIGSASRVPAINKILTEFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFPISVSWKGSGPDLQESGPDNQMSTVVFAKGNVIPSIKALTFYRRETFSIDVQYADVSELQTPPKISTYTIGPLPTTKVEKAKIKVKVRLNLHGIVSVESATLLEEEEVEVPVVKVPAEESAKMDTDEAPAEAATEEAAAAAEAAAAPPSSSDGDVDMQDAKATVDVPGVENGKAETVDKPVQMDTNAKAEAPKKKVRKTSIHVTELVYGVMSRSDVQKAVEKEFEMALQDRVMEETKEKKNAVEAYVYDMRNKLSDKYHEFVTDSEREAFTARLQEVEDWLYEEGEDESKGVYVAKLEELKKQGDPIEERYKEYMERGTVINQLVYCITSYREAAMSNDPKFDHIDISEKQKVLNECVEAEAWLREKHQQQDSLPKYATPVLFSAELRKKAEAVDRFCKPIMTKPRPAKPATPEATATPPPPQGDEQQQPLGDDNAGDNAEQAPPTSTEPMEADKSENSGAA 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1843g00003 859 MobiDBLite consensus disorder prediction 515 553 - -
Pral1843g00003 859 Gene3D Actin; Chain A, domain 4 230 313 - -
Pral1843g00003 859 Pfam Hsp70 protein 3 709 IPR013126 GO:0005524|GO:0140662
Pral1843g00003 859 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 641 IPR029047 -
Pral1843g00003 859 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 610 708 IPR029048 -
Pral1843g00003 859 Gene3D - 716 802 IPR029048 -
Pral1843g00003 859 Gene3D - 608 715 IPR029048 -
Pral1843g00003 859 PRINTS 70kDa heat shock protein signature 477 493 - -
Pral1843g00003 859 PRINTS 70kDa heat shock protein signature 332 348 - -
Pral1843g00003 859 PRINTS 70kDa heat shock protein signature 363 383 - -
Pral1843g00003 859 PRINTS 70kDa heat shock protein signature 2 15 - -
Pral1843g00003 859 PRINTS 70kDa heat shock protein signature 30 42 - -
Pral1843g00003 859 PRINTS 70kDa heat shock protein signature 140 160 - -
Pral1843g00003 859 Gene3D - 186 360 - -
Pral1843g00003 859 Coils Coil 694 714 - -
Pral1843g00003 859 PANTHER HSC70CB, ISOFORM G-RELATED 1 850 - -
Pral1843g00003 859 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pral1843g00003 859 CDD HSPA4_like_NDB 2 381 - -
Pral1843g00003 859 Gene3D - 5 374 - -
Pral1843g00003 859 MobiDBLite consensus disorder prediction 825 859 - -
Pral1843g00003 859 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 718 806 IPR029048 -
Pral1843g00003 859 FunFam Heat shock 70 kDa protein 4 608 718 - -
Pral1843g00003 859 MobiDBLite consensus disorder prediction 795 859 - -
Pral1843g00003 859 FunFam Heat shock 70 kDa protein 4 230 313 - -
Pral1843g00003 859 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Pral1843g00003 859 Gene3D - 38 113 - -
Pral1843g00003 859 MobiDBLite consensus disorder prediction 809 823 - -
Pral1843g00003 859 FunFam Heat shock 70 kDa protein 4 38 113 - -
Pral1843g00003 859 FunFam Heat shock 70 kDa protein 4 106 212 - -
Pral1843g00003 859 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 542 IPR029047 -
Pral1843g00003 859 FunFam Heat shock 70 kDa protein 4 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1843g00003 Pral-Chr1843 10252 16907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1843g00003 4 496 Calmodulin-binding Proteins AT1G16030 32.600 6.57e-84 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1843g00003 K09489 - gmx:100813658 1340.1