Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1842g00007 ATGGCTAACGGTGATCATGAAAGGAAGAAGAAAATCGCTGTTATTTCAGTCTCAGGGATCCTCCTGGTGGCCATGGTGGCCGCCGTGGGCGTCGGTCTATCTGGTGCCGGCGAAGCAGCCTACGATGCGGTTGGGTCCGGGGAGGATCATGGTGAGAAGAAACAGATTTCTGCGACTCAAAAGGACGTGGACGTGCTTTGCAGCTCAGCCGAATACAAGGAAACCTGCAAGCACAGCCTCTCAAAAGCGAACAATGGCACCACCGACGTTAAAGAACTCGTCAAAGCGGCCTTCCACGCCGCCGGCAAGGAGTTCAAGAAGTTCATTGATAACTCTACCCTGTTCGACGAGCTTGCCAAGGACAACATGACCAGACAGGCTATGGAGATCTGCCACGAGGTGTTAGACTACGCCATTGACGACATTAAAAACTCGATCAATAGCGTGGATCAGTTCGATATAAACAAGCTCGGTGAATACGCCTATGACGTTAAGGTGTGGCTCGGAGGCACTATCTCCCACCAACGGACCTGTTTGGACGGCTTCGAGAACACCACCACACACGCCGCCGAGACCATGGCCAGGGTGTTGAACACTTCCCTGGAGCTCAGCATGAACGCTTTGGATATTATCTCTGGCCTATCTGACGTCGCCCAAACCTTCGACTTCGCTGCTCATGGTGATAATAACAACACCTCCAGTCGGAAGCTTCTCGAGAGCTTGCCGTCTTGGGTAAGTGATAACCAACACCGTCACCTCCTCGCCGCAGCCGCAGCCGGTGCCGCCAACGTTAAGCCCAATGCTGTTGTGGCTCAAGATGGATCCGGGCAGTTCAAAACACTCACCGACGCTCTCAAAACTGTTCCCAAGAATAACATGAAACCCTATGTGATTTACGTGAAGGCCGGAGTATATAAGGAGACTGTGAACATACCCAAGCAATCCAGTCATATCACAATCGTCGGAGATGGTCCCACCGTCACCAGATTCACCGGCAGTCTCAACTTTGCTGACGGCGTCCAAACTTACAACACCGCAACATTCGGCGTGAATGCTCCTTACTTCACGGCCATGCACGTAGGGTTCGAGAACACAGCCGGAGCAATTAAGCACCAGGCCGTGGCTCTCCGAGTAACCGCTGATAAAGCCGTCTTCTACAACTGCCACATGGATGGGTACCAAGACACCCTCTACGCTCAGTCCCACCGCCAGTTCTACCGCGACTGTGTCATCTCCGGTACAATTGACTTCATCTTCGGTGACGCCGACATGGTCTTCCAGAATTGCACATTGGTCGTCAGGCCACCTTTAAACAACCAGAACTGCATCGTCTCCGCCAGTGGCCGCAACGTGATCAACAGTCCCAGCGCGATGGTGTTCCAGAGCTGCCACTTCACCGCCGACCCACTCTACCTCTCCGACCCGGCAAAGAAACCGGCATACCTCGGACGTCCATGGAGAGCATACGCCAAGGTGATCATCATGGATTCTCTGATCGACGGAATCTTCGCTCCCGAAGGTTACATGTCGTGGATGGGTAGCATCTATCACTTGACCAGCATCTTCAATGAGTACAACAACAAAGGTCCTGGCGCCGATACCTCTCACAGAGTGAAGTGGCCCGGCGTGAAGGTGATCACTGCCGCTCAAGCCGCAAATTTCTACCCTCGCAAGTTCTATGAATTCCGAAATGCAACTACCACTGATGACGATTCCTGGATCTCCGCCTCCGGGATTCCCTACTCCGTTGGCCCAATGGCCGTACCAAATTGA 1773 0.5324 MANGDHERKKKIAVISVSGILLVAMVAAVGVGLSGAGEAAYDAVGSGEDHGEKKQISATQKDVDVLCSSAEYKETCKHSLSKANNGTTDVKELVKAAFHAAGKEFKKFIDNSTLFDELAKDNMTRQAMEICHEVLDYAIDDIKNSINSVDQFDINKLGEYAYDVKVWLGGTISHQRTCLDGFENTTTHAAETMARVLNTSLELSMNALDIISGLSDVAQTFDFAAHGDNNNTSSRKLLESLPSWVSDNQHRHLLAAAAAGAANVKPNAVVAQDGSGQFKTLTDALKTVPKNNMKPYVIYVKAGVYKETVNIPKQSSHITIVGDGPTVTRFTGSLNFADGVQTYNTATFGVNAPYFTAMHVGFENTAGAIKHQAVALRVTADKAVFYNCHMDGYQDTLYAQSHRQFYRDCVISGTIDFIFGDADMVFQNCTLVVRPPLNNQNCIVSASGRNVINSPSAMVFQSCHFTADPLYLSDPAKKPAYLGRPWRAYAKVIIMDSLIDGIFAPEGYMSWMGSIYHLTSIFNEYNNKGPGADTSHRVKWPGVKVITAAQAANFYPRKFYEFRNATTTDDDSWISASGIPYSVGPMAVPN 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1842g00007 590 CDD PMEI-like_3 66 215 - -
Pral1842g00007 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 215 IPR035513 -
Pral1842g00007 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 214 IPR035513 -
Pral1842g00007 590 Pfam Pectinesterase 267 559 IPR000070 GO:0030599|GO:0042545
Pral1842g00007 590 Pfam Plant invertase/pectin methylesterase inhibitor 63 210 IPR006501 GO:0004857
Pral1842g00007 590 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Pral1842g00007 590 Gene3D - 264 586 IPR012334 -
Pral1842g00007 590 SMART PMEI_2 58 210 IPR006501 GO:0004857
Pral1842g00007 590 FunFam Pectinesterase 4 264 585 - -
Pral1842g00007 590 FunFam Pectinesterase 59 215 - -
Pral1842g00007 590 ProSitePatterns Pectinesterase signature 1. 292 311 IPR018040 -
Pral1842g00007 590 NCBIfam pectinesterase inhibitor domain 58 214 IPR006501 GO:0004857
Pral1842g00007 590 PANTHER PECTINESTERASE 17 575 - -
Pral1842g00007 590 SUPERFAMILY Pectin lyase-like 264 583 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1842g00007 Pral-Chr1842 36462 38521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1842g00007 5 587 Carbohydrate Esterase AT3G05610 43.493 3.81e-177 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1842g00007 K01051 - gmx:100800194 670.618