Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral183g00005 ATGGTATTTTACAGTACTAATGCGTCTGATGACTATGCTCGTTGCAGTTCTGCATTTGTTGAGAAGAACGAAACTCTCAACCCCGTCGTCGACGGCAACCTCAAGGAGCGAAGAGAAAGTAACAGATCTAAGGTAATTCTCGATTGGGCAGTTGATCAGAACAAATCATCATGCCGTGGAGCCTGCAAAAGTGATAATGCGGAATGCGAAGAATCAGAAAGTGTCAGTGGCTATTACTACTGTAAATGTGAAACGGGGTTCAAAGGCAACCCCTACACCGCGGGTGGCTGCAAAGATGTGGATGAGTGCCAGCACATCAACCTAAATAATTGTTTGCATAAGGATCGATGTCACAATACCCCTGGTGGCTACACATGTTCTTGTCCACATGGACAAAAAGGCAATGGCCGCCGTAATGAAACTGAACCAGGCTCAGGCTGCAGCACTACTGGGCCTAGCCTTATAATTCCATTAGTTGTTACTTTAGCTTTGTTGGGTGCCTTCACACTTGTCTCCACATTATGTTGGGCACACAAGCAAAGGAGTCTGATGCAACTCAGACAGAGAAATTTTGAGCAAAATGGAGGAAACTTGCTTCTACAACAACTTTCACAACAACAAAGATATACTGACAGAACCAGAATATTTACAAAAGTTGAGCTTAAGAATGCCACAAACAACTTTGATGAAAGCAGAATTCTTGGTCGTGGAGGACAAGGCACGGTTTATAAAGGTATATTGCCAGACAACACAATTGTTGCAATTAAGAAGTCCAGAGTTGGTGGGGATCCCCAAAATATTAAAAGTTTTATCAATGAAGTGTTTGTGCTTTCCCAGATCAACCACAGGCATGTGGTCAAACTTTTGGGATGTTGTCTTGAAACTGAAGTGCCTTTGTTAGTGTATGAGTTTGTAGAGAATGGAAGCCTTCTTGACCACCTAGACCCATCAAAAAATGAATGTTCTATCACATGGGAGACTCGATTAAGAATAGCTACAGAAACTGCTGAGGCCATTTCCTATTTACATTCTGCAGCTTCTATTCCAATTATCCATAGAGATATCAAGTCTGCCAATATACTTTTAGACCATAATGATAGAGCAAAGGTATCTGATTTTGGAGCTTCAAGACTTGTCCATCTTGGTGAAGCTCAAGTTGCCACTGTGGTTCAAGGAACAATAGGATATCTGGATCCTGAGTACCTTCAAACGGGTCAGTTGAATGAGAAGAGTGATGTCTATAGTTTTGGAATTGTGCTGCTGGAGTTACTCACTGGGAGTAAGGCTTTTAAATTCAATACATTGGCTAGCCATTTTGTGTCTTCAATGAGAGAAGATCGCCTGTGGGAGATTCTTGATAGGCGAGTACTAGACCAGAAGAAGAACGCAAAACAGTTGAAAGAAGTAGCCTTATTGGCAAGCAGATGCATTAGGGTTAATGGAGAGGAAAGGCCAACAATGAAAGAAGTAGCAATGGAGTTAGAGGGTCTAATTGCAATGGAAAAGCATCTTCAAGAGAAGGACAAGGATATGATGAAAGCAGAAGAAAGTGAATACTTATTGGGCCATTACACTAATGATGGATATGGGAGTGCCAGTGCTAGCTTCTCAGTTGCTAGCCATGATAGCATACAAAAGCAAGTGGCATTTGAGATTATAGATGGTGGGCGATGA 1674 0.4194 MVFYSTNASDDYARCSSAFVEKNETLNPVVDGNLKERRESNRSKVILDWAVDQNKSSCRGACKSDNAECEESESVSGYYYCKCETGFKGNPYTAGGCKDVDECQHINLNNCLHKDRCHNTPGGYTCSCPHGQKGNGRRNETEPGSGCSTTGPSLIIPLVVTLALLGAFTLVSTLCWAHKQRSLMQLRQRNFEQNGGNLLLQQLSQQQRYTDRTRIFTKVELKNATNNFDESRILGRGGQGTVYKGILPDNTIVAIKKSRVGGDPQNIKSFINEVFVLSQINHRHVVKLLGCCLETEVPLLVYEFVENGSLLDHLDPSKNECSITWETRLRIATETAEAISYLHSAASIPIIHRDIKSANILLDHNDRAKVSDFGASRLVHLGEAQVATVVQGTIGYLDPEYLQTGQLNEKSDVYSFGIVLLELLTGSKAFKFNTLASHFVSSMREDRLWEILDRRVLDQKKNAKQLKEVALLASRCIRVNGEERPTMKEVAMELEGLIAMEKHLQEKDKDMMKAEESEYLLGHYTNDGYGSASASFSVASHDSIQKQVAFEIIDGGR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral183g00005 557 ProSitePatterns Calcium-binding EGF-like domain signature. 99 126 IPR018097 GO:0005509
Pral183g00005 557 Gene3D Laminin 52 141 - -
Pral183g00005 557 Gene3D Transferase(Phosphotransferase) domain 1 305 520 - -
Pral183g00005 557 FunFam Fibrillin 2 94 140 - -
Pral183g00005 557 SUPERFAMILY EGF/Laminin 99 136 - -
Pral183g00005 557 Gene3D Phosphorylase Kinase; domain 1 200 304 - -
Pral183g00005 557 SMART serkin_6 228 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral183g00005 557 Pfam Calcium-binding EGF domain 99 135 IPR001881 GO:0005509
Pral183g00005 557 Pfam Protein kinase domain 229 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral183g00005 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Pral183g00005 557 SMART egfca_6 99 148 IPR001881 GO:0005509
Pral183g00005 557 FunFam Wall-associated receptor kinase 2 198 304 - -
Pral183g00005 557 FunFam Wall-associated receptor kinase 2 305 518 - -
Pral183g00005 557 SUPERFAMILY Protein kinase-like (PK-like) 206 494 IPR011009 -
Pral183g00005 557 ProSiteProfiles EGF-like domain profile. 99 140 IPR000742 -
Pral183g00005 557 ProSiteProfiles Protein kinase domain profile. 228 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral183g00005 557 SMART egf_5 102 148 IPR000742 -
Pral183g00005 557 SMART egf_5 57 98 IPR000742 -
Pral183g00005 557 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 500 IPR045274 GO:0007166
Pral183g00005 557 CDD EGF_CA 99 134 - -
Pral183g00005 557 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 117 128 IPR000152 -
Pral183g00005 557 Coils Coil 497 517 - -
Pral183g00005 557 CDD STKc_IRAK 234 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral183g00005 Pral-Chr183 16227 42884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral183g00005 3 555 Receptor kinase-like Gene Family AT1G21230 46.820 1.10e-156 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral183g00005 Pkinase 4.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral183g00005 - - pcin:129317315 757.673