Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral183g00004 ATGGTATTTTACAGTACTAATGCGTCTGATGACTATGCTCGTTGCAGTTCTGCATTTGTTGAGAAGAACGAAACTCTCAACCCCGTCGTCGACGGCAACCTCAAGGAGCGAAGAGAAAGTAACAGATCTAAGGTAATTCTCGATTGGGCAGTTGATCAGAACAAATCATCATGCCGTGGAGCCTGCAAAAGTGATAATGCGGAATGCGAAGAATCAGAAAGTGTCAGTGGCTATTACTACTGTAAATGTGAAACGGGGTTCAAAGGCAACCCCTACACCGCGGGTGGCTGCAAAGATGTGGATGAGTGCCAGCACATCAACCTAAATAATTGTTTGCATAAGGATCGATGTCACAATACCCCTGGTGGCTACACATGTTCTTGTCCACATGGACAAAAAGGCAATGGCCGCCGTAATGAAACTGAACCAGTTGTTACTTTAGCTTTGTTGGGTGCCTTCACACTTGTCTCCACATTATGTTGGGCACACAAGCAAAGGAGTCTGATGCAACTCAGACAGAGAAATTTTGAGCAAAATGGAGGAAACTTGCTTCTACAACAACTTTCACAACAACAAAGATATACTGACAGAACCAGAATATTTACAAAAGTTGAGCTTAAGAATGCCACAAACAACTTTGATGAAAGCAGAATTCTTGGTCGTGGAGGACAAGGCACGGTTTATAAAGGTATATTGCCAGACAACACAATTGTTGCAATTAAGAAGTCCAGAGTTGGTGGGGATCCCCAAAATATTAAAAGTTTTATCAATGAAGTGTTTGTGCTTTCCCAGATCAACCACAGGCATGTGGTCAAACTTTTGGGATGTTGTCTTGAAACTGAAGTGCCTTTGTTAGTGTATGAGTTTGTAGAGAATGGAAGCCTTCTTGACCACCTAGACCCATCAAAAAATGAATGTTCTATCACATGGGAGACTCGATTAAGAATAGCTACAGAAACTGCTGAGGCCATTTCCTATTTACATTCTGCAGCTTCTATTCCAATTATCCATAGAGATATCAAGTCTGCCAATATACTTTTAGACCATAATGATAGAGCAAAGGTATCTGATTTTGGAGCTTCAAGACTTGTCCATCTTGGTGAAGCTCAAGTTGCCACTGTGGTTCAAGGAACAATAGGATATCTGGATCCTGAGTACCTTCAAACGGGTCAGTTGAATGAGAAGAGTGATGTCTATAGTTTTGGAATTGTGCTGCTGGAGTTACTCACTGGGAGTAAGGCTTTTAAATTCAATACATTGGCTAGCCATTTTGTGTCTTCAATGAGAGAAGATCGCCTGTGGGAGATTCTTGATAGGCGAGTACTAGACCAGAAGAAGAACGCAAAACAGTTGAAAGAAGTAGCCTTATTGGCAAGCAGATGCATTAGGGTTAATGGAGAGGAAAGGCCAACAATGAAAGAAGTAGCAATGGAGTTAGAGGGTCTAATTGCAATGGAAAAGCATCTTCAAGAGAAGGACAAGGATATGATGAAAGCAGAAGAAAGTGAATACTTATTGGGCCATTACACTAATGATGGATATGGGAGTGCCAGTGCTAGCTTCTCAGTTGCTAGCCATGATAGCATACAAAAGCAAGTGGCATTTGAGATTATAGATGGTGGGCGATGA 1629 0.4168 MVFYSTNASDDYARCSSAFVEKNETLNPVVDGNLKERRESNRSKVILDWAVDQNKSSCRGACKSDNAECEESESVSGYYYCKCETGFKGNPYTAGGCKDVDECQHINLNNCLHKDRCHNTPGGYTCSCPHGQKGNGRRNETEPVVTLALLGAFTLVSTLCWAHKQRSLMQLRQRNFEQNGGNLLLQQLSQQQRYTDRTRIFTKVELKNATNNFDESRILGRGGQGTVYKGILPDNTIVAIKKSRVGGDPQNIKSFINEVFVLSQINHRHVVKLLGCCLETEVPLLVYEFVENGSLLDHLDPSKNECSITWETRLRIATETAEAISYLHSAASIPIIHRDIKSANILLDHNDRAKVSDFGASRLVHLGEAQVATVVQGTIGYLDPEYLQTGQLNEKSDVYSFGIVLLELLTGSKAFKFNTLASHFVSSMREDRLWEILDRRVLDQKKNAKQLKEVALLASRCIRVNGEERPTMKEVAMELEGLIAMEKHLQEKDKDMMKAEESEYLLGHYTNDGYGSASASFSVASHDSIQKQVAFEIIDGGR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral183g00004 542 Gene3D Phosphorylase Kinase; domain 1 185 289 - -
Pral183g00004 542 FunFam Wall-associated receptor kinase 2 183 289 - -
Pral183g00004 542 ProSitePatterns Calcium-binding EGF-like domain signature. 99 126 IPR018097 GO:0005509
Pral183g00004 542 FunFam Fibrillin 2 94 140 - -
Pral183g00004 542 SUPERFAMILY Growth factor receptor domain 57 135 IPR009030 -
Pral183g00004 542 Gene3D Laminin 52 141 - -
Pral183g00004 542 SMART egfca_6 99 142 IPR001881 GO:0005509
Pral183g00004 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Pral183g00004 542 SMART serkin_6 213 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral183g00004 542 Coils Coil 482 502 - -
Pral183g00004 542 SMART egf_5 57 98 IPR000742 -
Pral183g00004 542 SMART egf_5 102 142 IPR000742 -
Pral183g00004 542 SUPERFAMILY Protein kinase-like (PK-like) 191 479 IPR011009 -
Pral183g00004 542 Pfam Protein kinase domain 214 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral183g00004 542 FunFam Wall-associated receptor kinase 2 290 503 - -
Pral183g00004 542 CDD STKc_IRAK 219 482 - -
Pral183g00004 542 ProSiteProfiles EGF-like domain profile. 99 140 IPR000742 -
Pral183g00004 542 CDD EGF_CA 99 134 - -
Pral183g00004 542 Pfam Calcium-binding EGF domain 99 135 IPR001881 GO:0005509
Pral183g00004 542 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 117 128 IPR000152 -
Pral183g00004 542 Gene3D Transferase(Phosphotransferase) domain 1 290 505 - -
Pral183g00004 542 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 485 IPR045274 GO:0007166
Pral183g00004 542 ProSiteProfiles Protein kinase domain profile. 213 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral183g00004 Pral-Chr183 16227 42884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral183g00004 3 540 Receptor kinase-like Gene Family AT1G21230 46.726 6.01e-156 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral183g00004 Pkinase 4.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral183g00004 - - pcin:129317315 759.985