Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral183g00002 ATGGCTATTGCGGCCCCTGGGCAGCTGAACCTTAACGAGTACCCTTCATGGGGATCCAGAAGTGTTGATTGCTTCGAAAAGTTGGAGCAGATTGGCGAGGGAACTTATGGCCAAGTTTACATGGCTAGAGAAATCAGAACAGGTGAAATTGTTGCTTTGAAGAAAATAAGAATGGACAATGAGAGAGAGGGGTTTCCTATTACTGCTATTCGTGAAATCAAAATTCTGAAAAAATTACACCATGAAAATGTTATTAAGTTGAAGGAGATAGTGACATCACCAGGCCCTGAGAAAGATGAGCAAGGGAAGCCAGATGGAAACAAATATAAAGGTGGTATTTATATGGTATTCGAATACATGGACCATGATTTGACTGGTCTTGCTGATCGACCTGGGATGAGATTTACAGTTCCCCAAATCAAGTGTTACATGAGACAGCTTTTGACGGGTCTTCATTATTGCCATGTGAATCAAGTACTTCATCGTGATATAAAAGGATCCAATCTTCTTATAGACAATGAAGGCAATCTGAAGCTTGCAGATTTCGGACTTGCACGATCATTTTCTAATGACCACAATGCAAATCTTACAAATCGTGTGATCACATTATGGTATAGACCCCCAGAGCTGCTGCTGGGAACAACAAAGTATGGACCTGCTGTTGATATGTGGTCTGTTGGATGTATTTTTGCTGAGCTTCTCCATGGCAAGCCTATCTTCCCTGGAAAAGATGAGCCAGAACAACTAAACAAAATTTTTGAGCTTTGTGGAGCACCAGATGAAGTGAACTGGCCTGGGGTTTCTAAGTGTCCATGGTATAATCAGTTCAAACCCACAAGACCAATGAAAAGACGGCTGAGGGAAGTCTTCAGGCATTTTGATCGCCATGCTTTAGAATTGCTGGAGAGGATGTTGACACTTGATCCTGCTCAGGTACATCGCCTATCATAG 951 0.4217 MAIAAPGQLNLNEYPSWGSRSVDCFEKLEQIGEGTYGQVYMAREIRTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKCPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQVHRLS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral183g00002 316 Pfam Protein kinase domain 25 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral183g00002 316 FunFam Cyclin-dependent kinase C-2 12 121 - -
Pral183g00002 316 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral183g00002 316 FunFam Cyclin-dependent kinase C-2 122 315 - -
Pral183g00002 316 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Pral183g00002 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Pral183g00002 316 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral183g00002 316 SUPERFAMILY Protein kinase-like (PK-like) 18 311 IPR011009 -
Pral183g00002 316 Gene3D Transferase(Phosphotransferase) domain 1 122 316 - -
Pral183g00002 316 CDD STKc_CDK9_like 25 316 - -
Pral183g00002 316 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Pral183g00002 316 PANTHER CELL DIVISION PROTEIN KINASE 23 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral183g00002 Pral-Chr183 10239 36736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral183g00002 1 311 Core Cell Cycle Gene Families AT5G10270 87.500 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral183g00002 Pkinase 4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral183g00002 K08819 - mnt:21403150 632.869