Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1836g00002 ATGAGCATCTCCATGGTAACAAGCAGAAATGTGGCACAAACCCTGATCGATAGTCCTTCCAGCAGTCGAAAACTGATCAATCTTCCAAGGCAGAAAGAGAAGGTGGTGGTGGTCATGGGAGCCACCGGCACTGGAAAGTCCAGGCTCTCCATTGACCTCGCCACCCTTTTTCCTGCACAAATCATCAACTCCGACAAAATACAAGTCTATGAAGGCCTTGACACAGCCACGAATAAAATCACCAAGGAAGACCGACGAGGGGTGCCTCACCATTTGCTGGGAACAGAGAACCCCAACTCAGAGTTCACGGCCTCCCACTTCCGTGAAGCGGCTTTACTCACCATCGAGTCAATTACGTCTTGCGGACAGCTTCCGATCATCGTGGGAGGGTCCAACTCGTATATTGAGGCACTGATCGACGATGACGACTATAAATTCCGATCGAGATACGATTTCTGTTGTCTCTGGGCAGACGTGTCATTGCCCGTGCTCGACCAATACGTGGCCAAACGGGTTGATCAAATGTTGGAGAGTGGAATGGTAGATGAACTGAGACCCTTTTTCAATCCGAGGGGAGACTACTCACGAGGGATTAGAAAAGCTATCGGAGTTCCTGAGTTCGATCAGTATTTTCGAAACGAATCGTGGATAAGGGATGAAGGAATCAAGCAGAGGTTACTGGAAGAAGCGGTGAATGAAGTGAAGAAAAACACGTATAAATTGGCACGTAAACAACTGGGGAAGATTCAGAGATTGCGCGACGAAGAGATGGAGATGCAGCGGCTAGACGCGACAACCGTGTTCCGCAAGCAAGGGGAAGAAGCAGAGGAGGCATGGAAGAAGGTGGTGGCTGAGCCAAGTGCTATGAACGTCGCCAGGTTCCTTTACAATATTCCCTCTCTGAATGTTGGCCCCCCCTAG 921 0.4984 MSISMVTSRNVAQTLIDSPSSSRKLINLPRQKEKVVVVMGATGTGKSRLSIDLATLFPAQIINSDKIQVYEGLDTATNKITKEDRRGVPHHLLGTENPNSEFTASHFREAALLTIESITSCGQLPIIVGGSNSYIEALIDDDDYKFRSRYDFCCLWADVSLPVLDQYVAKRVDQMLESGMVDELRPFFNPRGDYSRGIRKAIGVPEFDQYFRNESWIRDEGIKQRLLEEAVNEVKKNTYKLARKQLGKIQRLRDVXEMEMQRLDATTVFRKQGEEAEEAWKKVVAEPSAMNVARFLYNIPSLNVGPP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1836g00002 307 Gene3D - 32 296 IPR027417 -
Pral1836g00002 307 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 32 295 IPR039657 -
Pral1836g00002 307 Pfam IPP transferase 146 246 - -
Pral1836g00002 307 Pfam IPP transferase 68 141 - -
Pral1836g00002 307 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 161 260 - -
Pral1836g00002 307 FunFam Adenylate isopentenyltransferase 5, chloroplastic 161 260 - -
Pral1836g00002 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 171 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1836g00002 Pral-Chr1836 11326 12411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1836g00002 148 296 C2H2 Transcription Factor Family AT2G27760 31.429 7.27e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1836g00002 K10760 - gmx:100803964 395.586