Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1835g00008 ATGTTCATTTGTTGTGCTCCTATAACTCCAGGTTCCATTGTCCTGGTTTTGTTGTTCGTTGTGTGCTTCTACATATGCCGCTACTTCAAGAACAAAGGAGATGATCAAGTCAGACTTGAAAAGTTTTTGAAGGACTACGAGGCACTTAAACCTACTAGATTCTCTTACGCTGATATCAAAAGAATCACAAAGAGTTTCAAGCACAAATTAGGTGAAGGTGCCCATGGAACAGTTTTCAGAGGTAAGCTTTCTTCTGAAATTCAAGTGGCTGTCAAAGTACTCAATAATTCGGACAGCGATGGACAAGACTTCATTAATGAAATTGGCACAATCGGCAAAATTCATCACATCAATGTTGTTCGTTTGCTGGGCTTTTGCGCTGATGGTTTTCACCGTGCTCTTGTTTATGACTTTTTTCCAAATGGTTCCCTCCAAAATTTCATATCTTCACCAGATAACAGAGAAAATTTCCTGGGATGGTCCAAGCTGCAACAAATTGCTCTTGGCATAGGAAAGGGGATTGAATATCTTCACCAAGGCTGTGATTACAGAATTCTTCATTTCGATATCAATCCTCAGAATGTGTTATTAGATGAAAATTTCACCCCCAAAATTTCTGATTTTGGTCTAGCTAAATTGTGCTCTAAAAATCAAAGTACAGTGTCAATGACAGCAGCAAGAGGAACCCTAGGATATATTGCACCTGAAGTTTTCTCTCAAATTTTGGAAATGTATCATACAAATCAGATGTTTATATTATGGGATGCTGCTCCTGGAAATGGTTGGTGGAAGGAAAAAATGTTGATATGA 810 0.3827 MFICCAPITPGSIVLVLLFVVCFYICRYFKNKGDDQVRLEKFLKDYEALKPTRFSYADIKRITKSFKHKLGEGAHGTVFRGKLSSEIQVAVKVLNNSDSDGQDFINEIGTIGKIHHINVVRLLGFCADGFHRALVYDFFPNGSLQNFISSPDNRENFLGWSKLQQIALGIGKGIEYLHQGCDYRILHFDINPQNVLLDENFTPKISDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVFSQILEMYHTNQMFILWDAAPGNGWWKEKMLI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1835g00008 269 PANTHER RUST RESISTANCE KINASE LR10-RELATED 38 242 IPR045874 GO:0004672
Pral1835g00008 269 Gene3D Transferase(Phosphotransferase) domain 1 139 249 - -
Pral1835g00008 269 FunFam serine/threonine-protein kinase PBS1-like 33 138 - -
Pral1835g00008 269 Gene3D Phosphorylase Kinase; domain 1 39 138 - -
Pral1835g00008 269 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
Pral1835g00008 269 Pfam Protein kinase domain 67 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00008 269 FunFam Os07g0541700 protein 139 229 - -
Pral1835g00008 269 SUPERFAMILY Protein kinase-like (PK-like) 48 242 IPR011009 -
Pral1835g00008 269 ProSiteProfiles Protein kinase domain profile. 64 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1835g00008 Pral-Chr1835 63519 64345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1835g00008 16 241 Receptor kinase-like Gene Family AT1G66910 49.351 2.14e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1835g00008 Pkinase 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1835g00008 - - tpra:123893290 384.415