Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1835g00006 ATGGGTAGAGGGATAATATGCTTAATCAGGTTCTGGGGCTTGATGTACTTCACTCTTGTGTATGTGACATCCCAAACAACGAGTTTTAAAGATGAGAGCAAAACCTGTAATCCGTCTCATTGCGGCATTATCACAAACATCTCATATCCATTTCGTCTGCGAGACGACCCCCCCAACTGTGGCGATCCGGCATACGAGTTAGCCTGTGAAAACAACATCACAGTGCTTGATTTGCATTCAGGAACATACCAGGTTCTGGGAATCAACTACAACAATTACACAATCCGAGTTAAAGATCCTGGCATTCGGGAGGGTGATTGCTCCTCCCTCCCTCGCTATTTCTTATCCCGATCTAATTTCAGCGACACTTATAATGGTTCCTTCGAATATGATAGGAATAATCCCTATGCTGTCTTTCTAGAAGCATCCGCAGGTTCAGAAGCTACAATCGACAACATCATTTACCTAAATTGTAGTGATCCGGTGAGGGACGATGCGGACTACGTGGATACGGCTCCCTGCGTGGATTGGGGATCCAAAGGAGATGGAGGAGGCCATGTTTATGCTGTAGTTGGAGACTTAGAGGCTGGGAGGTTGAAACCTGAGTGTCGTGTGAAATCAGTGGCCACCATTGTTTCAGATTGGAGTTCATTCCTGGACTGGAGAAGCTACTCATATGCTGATATTCACACAGTACTTTCCCATGGTTTTGAGATTTCATGGTGGCCGCTAGCTTGTCTGGATATTCACTGCGGAACTTACGAGACTTGCGTCCTCGACGATCGCACGCAAAAGGGCTATTGCTCACAAGTTTCTGGGACTTCATGTTTCGGTTTGGAAGGAGTATCTATTTCTCTCTTTTGTGGAAAGGCGGCATATCTGAGCACTCGTGTAAAAGTTGCAGAGTCAGTGCATAAGGAGATTGAGTTCGAGGCTGGTGATAAATATGATGGCGATTTCATTTCACTACAAGTTGCATTCGCCTTGGGAAAAATCACAGGATATGTTTTCACTGTCATTATTCTAAGATTTCTGGTTGGTATATTATTTCTGTTCATCTTGTTGATTTACACATGGCGGAGAAGACACTTATCAGGCTATGGAAGCATTGAGGATTTCATACGACTTCATAACCTTCATCCATTAAGGTACTCCTACAAGGATTTAAAGACTATGACAAAATGTTTCAAGACTAAGTTAGGTGAAGGAGGCTTTGGGACTGTGTACAAAGGCAAGTTAAGAAGTGGACCTGATGTCGCAATTAAAATGTTGGGTGATGAATCCAAAGCTACTTGCCAAGACTTCATCAATGAGGTGGCAACTATAGGAAGGATACACCATTTCAATGTGGTACGTCTTGTGGGCTTTTGTGTGGAAGGAACTAAACATGCTCTTATTTATGAATTCATGTCCAATGGATCTTTGGATAAACATATTTTTGTTAAAGAAGGACAATCCTCCTTGAATTATCATAAGATATATGAGATATCTTTAGGAGTGGCTCGTGGCATTGCTTATCTTCATCATGGTTGTGACATGCAAATCTTGCATTTTGATATCAAGCCTCATAATATTCTTCTTGATGACAACTTGACCCCCAAAATTTCAGACTTTGGACTAGCAAAGCTATATTCTAGTGATAATAGCATTGCCACTTTAACTGCAGCAAGAGGGACAATAGGGTACATAGCTCCTGAACTATTCTATAAGAATATTGGAAAAGTGTCCTATAAATCTGATGTTTACAGTTTTGGAATGCTTTTAATGGAAATGACGAGCCGAAGAAGAAACTTAAATCCGCATGCAGAGCATTCAAGCCAATTATATTTTCCCTTATGGATCTATGACCAATTTGATGAAGAGAAAGGTATAGAAATGGAGGATTTGATAGAAGAGGAAAAAGCTTTAGCAAAGAAAATGTTCATAGTAGCATTATGGTGCATTCAGTTTAATCCTGCTGATCGTCCTTCAATGAAAAAAGTAATAGAGATGTTAGAAGTAGACGATGTTCAAAGTCTTGAGATGCCTCCAAAACCTTCTATATATCCTGATGATAATGTCAGAGCCAACTGTGACCAAACATCATCTTTACCCACAAGTTCTGATGGCAATCTAGAAGAGGATGCAAGTGACAAGACATAA 2142 0.4085 MGRGIICLIRFWGLMYFTLVYVTSQTTSFKDESKTCNPSHCGIITNISYPFRLRDDPPNCGDPAYELACENNITVLDLHSGTYQVLGINYNNYTIRVKDPGIREGDCSSLPRYFLSRSNFSDTYNGSFEYDRNNPYAVFLEASAGSEATIDNIIYLNCSDPVRDDADYVDTAPCVDWGSKGDGGGHVYAVVGDLEAGRLKPECRVKSVATIVSDWSSFLDWRSYSYADIHTVLSHGFEISWWPLACLDIHCGTYETCVLDDRTQKGYCSQVSGTSCFGLEGVSISLFCGKAAYLSTRVKVAESVHKEIEFEAGDKYDGDFISLQVAFALGKITGYVFTVIILRFLVGILFLFILLIYTWRRRHLSGYGSIEDFIRLHNLHPLRYSYKDLKTMTKCFKTKLGEGGFGTVYKGKLRSGPDVAIKMLGDESKATCQDFINEVATIGRIHHFNVVRLVGFCVEGTKHALIYEFMSNGSLDKHIFVKEGQSSLNYHKIYEISLGVARGIAYLHHGCDMQILHFDIKPHNILLDDNLTPKISDFGLAKLYSSDNSIATLTAARGTIGYIAPELFYKNIGKVSYKSDVYSFGMLLMEMTSRRRNLNPHAEHSSQLYFPLWIYDQFDEEKGIEMEDLIEEEKALAKKMFIVALWCIQFNPADRPSMKKVIEMLEVDDVQSLEMPPKPSIYPDDNVRANCDQTSSLPTSSDGNLEEDASDKT 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1835g00006 713 MobiDBLite consensus disorder prediction 674 713 - -
Pral1835g00006 713 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Pral1835g00006 713 ProSiteProfiles Protein kinase domain profile. 394 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00006 713 FunFam S-receptor-like serine/threonine-protein kinase 368 469 - -
Pral1835g00006 713 Pfam Protein kinase domain 397 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00006 713 Pfam Wall-associated receptor kinase galacturonan-binding 36 99 IPR025287 GO:0030247
Pral1835g00006 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Pral1835g00006 713 SUPERFAMILY Protein kinase-like (PK-like) 378 667 IPR011009 -
Pral1835g00006 713 FunFam PR5-like receptor kinase 470 677 - -
Pral1835g00006 713 SMART serkin_6 394 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00006 713 PANTHER RUST RESISTANCE KINASE LR10-RELATED 369 686 IPR045874 GO:0004672
Pral1835g00006 713 Gene3D Phosphorylase Kinase; domain 1 371 469 - -
Pral1835g00006 713 MobiDBLite consensus disorder prediction 687 704 - -
Pral1835g00006 713 CDD STKc_IRAK 400 666 - -
Pral1835g00006 713 Gene3D Transferase(Phosphotransferase) domain 1 470 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1835g00006 Pral-Chr1835 46761 51669 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1835g00006 348 701 Receptor kinase-like Gene Family AT4G18250 46.092 1.06e-99 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1835g00006 Pkinase 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1835g00006 - - pcin:129321062 947.962