Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1835g00005 ATGGTTTGCTGTCAGAGAGCTTTGTGGTTGGTGATAATGCAGTTGTTGGTGCTGCTTATGAATCTGGGGAATGCTCAGAACCAGTGTGTCCCTGCTGATGAAAGTGTTCCGTTCCGTCTAGTACAGGCCACACTTGATAGTAATCCCTGTTCTACTACAACTAACAATGTGGAGATGGTTGAGTTCCCGGGAGTACCGGCTCTTCAAGGAGTTAGACTCGCCGTCTTAGAAAAACACTATAAGTCCCGCATCTTAAAATTATGTGATGTTGAAGGCTGTCTTCCTAAACTCTTTCTACGACTTCATCATTCATCCATTTATCCTTTCCAATTTGAAACAGTTAGGTCGGCATCATCCAACAAAAGTTTCGGTGTTACATTTTTCAATTGTTCCTCGATTGGGTCGGAATACTTGAAAAACGATGATTACGTGTTCCAAGCAAATTTGCATGTTTGTCCCATTTATGTTGTTGGCTCCACCGAAGGTATCCTTGAGAGGGACGTGACCTCTTGCACCAAGATGTTGCAGTTAGATTCACCATTAGACCAAGATGATTTTCTGTTCAACAATTTTAACTTTAGATGGCCCCACCCCAAATGTGATGTCGATAGCAGCAAGACAATATTATTCAAATTTGTTTTACCAGCTTCAGGTTCAATTGCGTCAGTTTTGTGCATTGTGTTCCTTCTACTAATATATCGCTACTTCAAAACGAAAGGAGATGATCATGCAACGCTTGAAAAGTTTTTGAAGGATTACGAAGCTCTCAAGCCTACAAGATTTTCCTATGCTGATCTCAAAAGAATTACAAACAATTTCAAGGATAAAATAGGCGAAGGAGCTCATGGATCAGTGTTCAAAGGTAAGCTATCCAATCAGATTATAGTAGCTGTGAAGTTACTCAACAACTCTGATGACGATGGGAAGGACTTCATTAATGAAGTCGGGACTATGGGTAAAATTCATCACATCAATGTCGTTCGTTTGCTTGGCTTTTGTGCTGATGGTTTTCACCGTGCTCTTATTTATGACTTTTTTCCAAATGGTTCCCTCCAAAAGTTCATATCTTCCCCAGACAACAAGGAAAATTTTCTTGGATGGTTGAAGTTGCAACAAATAGCTCTGGGCGTAGCCAAAGGGATTGAATATCTACACCATGATTGTGATTATCAAATTCTTCATTTTGACATCAATCCTGGTAATGTGTTATTAGATCATAACTTTACTCCCAAAATTTCTGATTTTGGTCTAGCAAAATTGTGTTCCAAAAATCAAAGTGCTGTGTCGATAACAGCAGCTAGAGGAACTTTAGGCTATATTGCACCTGAGGTTTTCTCTAAAAACTTTGGAAATGTGTCATATAAATCAGATGTCTACAGTTATGGGATGTTATTGTTAGAAATAGTTGGAGGAAGGAAAAATACCCACACAAGTGAAGAAGCTTTCCAAATTTTATATCCAAAATGGATCCATAATTTGATTGAAGGGGGAGACATAAATATTCACATTGAAGATGAAGATGACAATAAAATTGCTAGGAAACTAGCAATTGTGGGACTTTGGTGCATCCAATGGCATCCGATCAGTCGTCTATCCATGAAAACAGTGATACAGATGTTAGAAGGAGAAGGTGATGAATTAAAAGTGCCCCCAATTCAATTTGACTCCAGAAATTCTATTAATACAAGGATCAACATTCCAGCAAGACATTTGAATTTGGGATTGGAAATTATTCATGAATTAGAATAA 1749 0.3836 MVCCQRALWLVIMQLLVLLMNLGNAQNQCVPADESVPFRLVQATLDSNPCSTTTNNVEMVEFPGVPALQGVRLAVLEKHYKSRILKLCDVEGCLPKLFLRLHHSSIYPFQFETVRSASSNKSFGVTFFNCSSIGSEYLKNDDYVFQANLHVCPIYVVGSTEGILERDVTSCTKMLQLDSPLDQDDFLFNNFNFRWPHPKCDVDSSKTILFKFVLPASGSIASVLCIVFLLLIYRYFKTKGDDHATLEKFLKDYEALKPTRFSYADLKRITNNFKDKIGEGAHGSVFKGKLSNQIIVAVKLLNNSDDDGKDFINEVGTMGKIHHINVVRLLGFCADGFHRALIYDFFPNGSLQKFISSPDNKENFLGWLKLQQIALGVAKGIEYLHHDCDYQILHFDINPGNVLLDHNFTPKISDFGLAKLCSKNQSAVSITAARGTLGYIAPEVFSKNFGNVSYKSDVYSYGMLLLEIVGGRKNTHTSEEAFQILYPKWIHNLIEGGDINIHIEDEDDNKIARKLAIVGLWCIQWHPISRLSMKTVIQMLEGEGDELKVPPIQFDSRNSINTRINIPARHLNLGLEIIHELE 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1835g00005 582 Pfam Protein kinase domain 274 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00005 582 Gene3D Phosphorylase Kinase; domain 1 246 345 - -
Pral1835g00005 582 ProSitePatterns Protein kinases ATP-binding region signature. 277 299 IPR017441 GO:0005524
Pral1835g00005 582 FunFam PR5-like receptor kinase 346 551 - -
Pral1835g00005 582 FunFam serine/threonine-protein kinase PBS1-like 241 345 - -
Pral1835g00005 582 SUPERFAMILY Protein kinase-like (PK-like) 255 541 IPR011009 -
Pral1835g00005 582 ProSiteProfiles Protein kinase domain profile. 271 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00005 582 Gene3D Transferase(Phosphotransferase) domain 1 346 549 - -
Pral1835g00005 582 PANTHER RUST RESISTANCE KINASE LR10-RELATED 243 556 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1835g00005 Pral-Chr1835 44499 46763 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1835g00005 216 551 Receptor kinase-like Gene Family AT1G66910 47.701 1.36e-100 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1835g00005 Pkinase 9.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1835g00005 - - tpra:123893308 607.831