Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1835g00004 ATGGGGAGAGGGAAAATAGGCTGGACCAGGTTATGGGGTTTAACGTTGTTCACTTGTGTGTATGTAACACCCCAAACAATGAGCTCAAAGAATGGGAGCAAAACCTGTAATCTGTCTCAGTGCGGCATCATCACAAACATCTCATATCCATTTCGTCTCCGAGATGACCCACCCAACTGTGGCCTCCGGGCTTACGAGTTAGCCTGTGAAAACAACGTCGCTCTGCTTCATCTCCATCCAGCAGGAACAGCAACGTACCAAGTCCTGGGAATCAACTACGACAACTACACAATCCGAGTCAAAGATCCTGGCATTCGGGAGGGTGACTGCTCCTCCCTCCCTCTCTATTTCTTATCCCAATCTAATTTCACTGACACTTACAATCTTTCCAGCGATTATAAATATGACACCAATAATCCCTATGCTGTCTTTATGGACCCATTGTCTGAAGAGCTCTTATTCGAGCACATCATTTACCTGAACTGTAGTGAGCCGGTGAGGGACGATGCGGGCTACGTGGATACGGCTCCCTGCGTGGACTGGGGAGCCAAAGGAGAAGGAGGAGGCCATGTTTATGTCGTGGCTGGCAGAGACTTAGAGGCCCAGAGGTTGAAACCTGAGTGTCGCGTGAAATCAGTGGCCACCATTGCTTCAGACTGGAGTTCATTCCTGGAGAGGAAAAGCCACTCCTACGCTGATCTTCACACAGCACTTTCCTATGGTTTTGAGATTTCATGGTGGCGACTAGGTTGTTCTGATCTTTCTTGTGCAGCTAACGAGAGGTGCTCGTTCGACAGTCAGCCGCGAAAGGTCCATTGCGAACACTGGAAATTTCTGGTTGGTATGGTATTTCTGTTCATCTTGCTGATTTACAAATATCGGAGAAGACACTTGTCAGGCTATGGAAGCATTGAAGATTTCATACAACTTCATAACCTTCATCCAATAAGGTACTCATACAAGGAACTGAAGACTATGACAAAAGATTTCAAGAGTAAGTTGGGTGAAGGAGGCTTTGGCACTGTCTACAAAGGGAGGCTAAGGAGCGGACCTGATGTCGCAATTAAAATGTTGGGCAATAAATCCAAAGCTACTTGTCAAGACTTTATCAATGAGGTGGCAACTATCGGAAGGATACACCATTTCAATGTGGTACGTCTTGTTGGCTTTTGTGTGGAAGGAACTAAACGTGCTCTTATCTATGAATTCATGTCCAATGGATCTTTGGATAAACATATTTTTGTCAAAGAAGAAAGTGCCTCCTTAAGTTATCTCAAAATCTACGACATATCTTTAGGAGTGGCTCGTGGCATTGCTTATCTTCATCATGGTTGTGACATGCAAATATTGCATTTTGATATCAAGCCTCATAATATTCTTCTTGATAACAATTGGACCCCAAAAATTTCAGATTTTGGACTGGCAAAATTATATGTTATTGATGATAGCATTCCCACTTTGACTGCAACAAGAGGGACCATAGGATACATAGCTCCCGAATTATTCTATAAGAATATTGGGAAAGTATCTCATAAATCTGATGTTTATAGTTTTGGAATGCTTTTAATGGAAATGGCAAGCCAAAGAAGAAACTTGAATCCACATGTAGAGCATTCAAGCCAATTATATTTTCCATCATGGATTTATGACCAATTTGATGAAGAGAAAGATATAGAAGTAATGGATGATATGACAGAAGAGGAAAAGGCTTTGGCAAAGAAAATGTTCATAGTAGCATTATGGTGCATTCAGTTTAATCCTGCCGATCGCCCTTCAATGAACAAAGTAATAGAGATGTTAGAAGTAGATGATGCTTCAAGTCTTGAAATGCCTCCAAAACCTTCTCTGTATCCTACAAATGACAGACCCCACTGTGATGAAACATCATCTTTATCCTTCACGTGTTCTCATTCCAATCTATGTGAGGATGCAAGCAACATGCAGGAATAA 1950 0.4231 MGRGKIGWTRLWGLTLFTCVYVTPQTMSSKNGSKTCNLSQCGIITNISYPFRLRDDPPNCGLRAYELACENNVALLHLHPAGTATYQVLGINYDNYTIRVKDPGIREGDCSSLPLYFLSQSNFTDTYNLSSDYKYDTNNPYAVFMDPLSEELLFEHIIYLNCSEPVRDDAGYVDTAPCVDWGAKGEGGGHVYVVAGRDLEAQRLKPECRVKSVATIASDWSSFLERKSHSYADLHTALSYGFEISWWRLGCSDLSCAANERCSFDSQPRKVHCEHWKFLVGMVFLFILLIYKYRRRHLSGYGSIEDFIQLHNLHPIRYSYKELKTMTKDFKSKLGEGGFGTVYKGRLRSGPDVAIKMLGNKSKATCQDFINEVATIGRIHHFNVVRLVGFCVEGTKRALIYEFMSNGSLDKHIFVKEESASLSYLKIYDISLGVARGIAYLHHGCDMQILHFDIKPHNILLDNNWTPKISDFGLAKLYVIDDSIPTLTATRGTIGYIAPELFYKNIGKVSHKSDVYSFGMLLMEMASQRRNLNPHVEHSSQLYFPSWIYDQFDEEKDIEVMDDMTEEEKALAKKMFIVALWCIQFNPADRPSMNKVIEMLEVDDASSLEMPPKPSLYPTNDRPHCDETSSLSFTCSHSNLCEDASNMQE 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1835g00004 649 Gene3D Transferase(Phosphotransferase) domain 1 404 610 - -
Pral1835g00004 649 FunFam serine/threonine-protein kinase PBS1-like 302 403 - -
Pral1835g00004 649 SMART serkin_6 328 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00004 649 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Pral1835g00004 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Pral1835g00004 649 PANTHER RUST RESISTANCE KINASE LR10-RELATED 303 620 IPR045874 GO:0004672
Pral1835g00004 649 FunFam PR5-like receptor kinase 404 612 - -
Pral1835g00004 649 SUPERFAMILY Protein kinase-like (PK-like) 311 602 IPR011009 -
Pral1835g00004 649 Gene3D Phosphorylase Kinase; domain 1 304 403 - -
Pral1835g00004 649 ProSiteProfiles Protein kinase domain profile. 328 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00004 649 CDD STKc_IRAK 334 601 - -
Pral1835g00004 649 Pfam Protein kinase domain 331 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1835g00004 649 Pfam Wall-associated receptor kinase galacturonan-binding 36 102 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1835g00004 Pral-Chr1835 33075 41487 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1835g00004 6 617 Receptor kinase-like Gene Family AT5G38260 35.185 2.32e-106 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1835g00004 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1835g00004 - - gmx:100305358 666.766