LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1832g00005	ATGGCGGAGGACCGCAACGGCGATAAGAATGAAAACAGTGATTACAGTTCAGAGGACGAAGGAACTGAGGATTACAGGCGAGGAGGTTACCATGCCGTTCGAATTGGGGATACTTTCAATAATGGGTTCTATGTGGTGCAGGCCAAGCTTGGTTGGGGTCATTTTTCTACTGTCTGGCTTGCTTGGGACGTCCAGAGATCGCGTTATGTGGCCTTGAAAATTCAAAAGAGTGCTCAGCATTATACTGAAGCTGCCATGGATGAAATAAAGATTCTTAAACAGATTGCAGAAGGGGACCCAGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTCAAGCATTCTGGTCCTAATGGTCAGCATGTATGTATGGTATTTGAATTTCTGGGTGACAATCTTCTGACACTTATCAAGTATAGTGATTACAGAGGGGTTCCTCTCCCCATGGTTAAAGAAATTTGCTACCATATTTTGGTGGGCCTGGATTACTTGCATCGAGAGCTTTCCATAATACATACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCTATGATAGATCCGTCTAAGGATCACAGAAAGTCAGGTGCCGGACTCATTCTTCCTAGCACCAAGGACAATTCTGTATCCAGGAATGAGGTCACAAAAGATAATGTTAATTTGAATGGAAATCTGAGCAAAAACCAAAAGAAGAAAATGCATAGAACGGCTAAGGTTGATAATGAAATTATTGAGGGGGCAGGGGGTTCTAAAGATCATGATCAAGAAGATTCTAGCAATGATCTAAAATCGAACTCTGAATCTGTTGAAGATAAATCCAGTAGTTCGGTGGGTAAAGATGAACCAACAAAGATTGTCGAAACTAAGGATGTTCCGCAGGGAAGTCAGAGTCAGAGGAAAATCAGCCGTTCCATGAGAAAAAAGTTGCTTGCAGCTGTTGATCTAAAGTGCAAACTGGTTGATTTCGGAAATGCTTGTTGGACTTATAAGCAATTCACAAATGATATTCAAACGAGGCAGTATAGATGTCCTGAGGTTATTCTTGGATCTAAATACTCAACGCCAGCGGATTTGTGGTCTTTTGCTTGCATTTGCTTTGAGCTGGCCACTGGTGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAACTTCTTGGAATGATGCCTCGCAAGATTGCACTAGGGGGCCGCTATTCCCGGGAATTTTTCAATAGATATGGTGATCTAAGGCACATTCGTCGGTTGCGGTTCTGGCCTCTTAATAAGGTGCTTATAGAGAAGTATAATTTCAGTGAGCAAGACGCAAAAGACATGACAAACTTCCTCATTCCCATACTTGATTTCGTCCCCGAAAATCGGCCAACAGCTGCTCAGTGTCTTAGTCATACCTGGTTCAGTGCTGGTCCTCGGATTCTTCAGCCCTGTTCAACTACCGTGCAACCTGAGGCCATCGAGGAGGGAATGTCTGAAGAAACAAAGCGGGATAAGGCTGAGCAGGAAGCTGTGGAAGTTGGTGTGGGCAATATAGCCATTGATGGCACTCCAAAGCCACTCAAGAAGTCCCAGTCTGTCAAGTGA	1617	0.4348	MAEDRNGDKNENSDYSSEDEGTEDYRRGGYHAVRIGDTFNNGFYVVQAKLGWGHFSTVWLAWDVQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICYHILVGLDYLHRELSIIHTDLKPENVLLLSMIDPSKDHRKSGAGLILPSTKDNSVSRNEVTKDNVNLNGNLSKNQKKKMHRTAKVDNEIIEGAGGSKDHDQEDSSNDLKSNSESVEDKSSSSVGKDEPTKIVETKDVPQGSQSQRKISRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRRLRFWPLNKVLIEKYNFSEQDAKDMTNFLIPILDFVPENRPTAAQCLSHTWFSAGPRILQPCSTTVQPEAIEEGMSEETKRDKAEQEAVEVGVGNIAIDGTPKPLKKSQSVK	538

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1832g00005	538	FunFam	Serine/threonine-protein kinase SRPK-like protein	308	478	-	-
	Pral1832g00005	538	MobiDBLite	consensus disorder prediction	202	228	-	-
	Pral1832g00005	538	MobiDBLite	consensus disorder prediction	236	288	-	-
	Pral1832g00005	538	ProSiteProfiles	Protein kinase domain profile.	44	478	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1832g00005	538	PANTHER	PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED	10	502	-	-
	Pral1832g00005	538	CDD	STKc_SRPK	33	478	-	-
	Pral1832g00005	538	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	171	183	IPR008271	GO:0004672\|GO:0006468
	Pral1832g00005	538	ProSitePatterns	Protein kinases ATP-binding region signature.	50	73	IPR017441	GO:0005524
	Pral1832g00005	538	MobiDBLite	consensus disorder prediction	1	23	-	-
	Pral1832g00005	538	Gene3D	Transferase(Phosphotransferase) domain 1	127	479	-	-
	Pral1832g00005	538	SMART	serkin_6	44	478	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1832g00005	538	Pfam	Protein kinase domain	44	184	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1832g00005	538	Pfam	Protein kinase domain	315	478	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1832g00005	538	SUPERFAMILY	Protein kinase-like (PK-like)	39	488	IPR011009	-
	Pral1832g00005	538	Gene3D	Phosphorylase Kinase; domain 1	20	126	-	-
	Pral1832g00005	538	FunFam	CMGC/SRPK protein kinase	30	129	-	-
	Pral1832g00005	538	MobiDBLite	consensus disorder prediction	193	303	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1832g00005	Pral-Chr1832	28115	31455	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1832g00005	1	529	EF-hand Containing Proteins	AT5G22840	66.478	0.0	733

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_SRPK	Pral1832g00005		Pkinase	1.3e-19	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1832g00005	K08832		-	gmx:100791829	859.751