Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1825g00012 ATGAAGTATCTTCGGAGCAATAGCTTCAAGCGTCTCTTCTCCTTCAAACGACGCAGTTTTGGGGAACAAGTTTTGACCCCTGCAGGCGCAGAAACTCCTGGAAGACCCACTTGGAAATGCTTCTCTTATCAAGAACTATTTGATGCCACCAATGGCTTCTGCTCTGAGAATCTGGTTGGAAAAGGAGGGCATGCAGAGGTTTATAAGGGAAGATTAGAAGATAAAGAGGAAATCGCAGTGAAGAGGCTAACAAAAAGCTGTAATGATGAGAGGAAAGAGAAGGAGTTTCTAACAGAGATTGGAACAATTGGTCATGTTCGTCATTCAAATGTTTTACCACTTCTTGGTTGCTGTATTGACAATGGACTTTACCTCGTCTTTGAGTTTTCCTCTAGAGGCTCTGTTGCTTCTCTTCTTCATGATGAGAATAAGCCTGTCATGGAATGGAAAGTAAGGCATAAAATTGCTCTTGGGACTGCACGTGGCCTCCATTACTTGCACAAGGGTTGCCAGAGAAGAATAATTCACAGAGACATCAAGGCCTCCAACGTTCTTTTGACTTCAGATTTTGAACCACAGATATCTGACTTTGGACTTGCGAGATGGCTTCCTTCACAGTGGTCTCATCATTCCATTGCCCCAATTGAAGGCACATTTGGGCATTTGGCTCCTGAGTATTACCTGCATGGCATTGTGGATGAGAAAACTGATGCATTTGCATTTGGGGTGTTTCTGTTAGAACTCATCTCTGGGAGAAAACCTGTGGATGGATCAAACCAGAGTTTACACAACTGGGCTAGGCCAATATTGAAGAGAGGAGAGCTAGAAAAATTGGTGGATCCAAGGCTTGAAGGAGCTTATGATGTTTCAGAGTTAACAAAGCTTGCTTTTGCAGCCTCTCTGTGTATCCGACCATCTTCCACTTGGAGACCTACCGTGACTCAGGTATTAGAGATGATGGAGGAGGGAGAAATAGATAAAGATAAATGGAAAATGCCAGAAGAAGAAGGGGAAGGAGAAGATCAGGAGGTTTGGGGTTTTGAGGATTTGGAATATGAATGTGATAGTTTCTCCTCAGTGTCCCTCCCTGACTCCATTACAAGTAATTAG 1110 0.4342 MKYLRSNSFKRLFSFKRRSFGEQVLTPAGAETPGRPTWKCFSYQELFDATNGFCSENLVGKGGHAEVYKGRLEDKEEIAVKRLTKSCNDERKEKEFLTEIGTIGHVRHSNVLPLLGCCIDNGLYLVFEFSSRGSVASLLHDENKPVMEWKVRHKIALGTARGLHYLHKGCQRRIIHRDIKASNVLLTSDFEPQISDFGLARWLPSQWSHHSIAPIEGTFGHLAPEYYLHGIVDEKTDAFAFGVFLLELISGRKPVDGSNQSLHNWARPILKRGELEKLVDPRLEGAYDVSELTKLAFAASLCIRPSSTWRPTVTQVLEMMEEGEIDKDKWKMPEEEGEGEDQEVWGFEDLEYECDSFSSVSLPDSITSN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1825g00012 369 PANTHER OS08G0249100 PROTEIN 32 350 IPR046958 -
Pral1825g00012 369 Pfam Protein kinase domain 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1825g00012 369 ProSiteProfiles Protein kinase domain profile. 53 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1825g00012 369 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Pral1825g00012 369 FunFam Putative receptor-like serine/threonine-protein kinase 22 129 - -
Pral1825g00012 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Pral1825g00012 369 Gene3D Phosphorylase Kinase; domain 1 30 129 - -
Pral1825g00012 369 FunFam Putative receptor-like serine/threonine-protein kinase 131 346 - -
Pral1825g00012 369 Gene3D Transferase(Phosphotransferase) domain 1 131 341 - -
Pral1825g00012 369 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
Pral1825g00012 369 SMART serkin_6 53 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1825g00012 Pral-Chr1825 104697 108081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1825g00012 39 342 Receptor kinase-like Gene Family AT1G60800 42.628 4.44e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral1825g00012 Pkinase 6.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1825g00012 - - ahf:112697971 595.504