Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1824g00002 ATGCAGTCGTGCACCATGGGAAGCATGGAGGTGCATCAGTTTGCACGTGGGCTCATGTTTGAGCACGAACCTTCCCTCACTCTGGGCTTCAAACGCTTACGCCCTCTTGCCCCCAAGCTCCACAACAACACTCACTCTCATTCCCTTTCCTCTTTCATCAGACCCGAAAGTGGCCCCAGAAAACTCCCTTCCCCTCACCCTCACCCTCACCCTCACAAAGATTCGCCGCCCCAGGTGGAGGCGCACCCAGGAGGAACGAGGTGGAATCCGACGCAGGAACAGATAGGGATACTGGAGATGCTGTACAGAGGTGGAATGCGAACTCCAAATGCTGAGCAGATAGAACAGATCACTGCTCAGCTTGGCAAATACGGCAAAATCGAAGGCAAGAATGTCTTCTACTGGTTTCAAAACCACAAGGCCCGTGAAAGACAAAAGCAGAAACGCAACCCTAATACTAGCACCACTTCTTCTACTCCTCCACCTACCACTGCCATTCCTTTAACTTTACGGACAACGGGCCAAGTAGGAGAAGGAGAGCAGGAAAACCCGTTGAGGAAGAGGTGTAGGAGCCTGGCATTTGAGTGCTTTCCATTAGAAGAAAGCAGATTATTACGTAGAGATGAGGAATACAAAACCCTGGAGCTTTTCCCGTTGCACCCGGAAGGCAAATGA 675 0.5126 MQSCTMGSMEVHQFARGLMFEHEPSLTLGFKRLRPLAPKLHNNTHSHSLSSFIRPESGPRKLPSPHPHPHPHKDSPPQVEAHPGGTRWNPTQEQIGILEMLYRGGMRTPNAEQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNPNTSTTSSTPPPTTAIPLTLRTTGQVGEGEQENPLRKRCRSLAFECFPLEESRLLRRDEEYKTLELFPLHPEGK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1824g00002 224 MobiDBLite consensus disorder prediction 141 168 - -
Pral1824g00002 224 SMART HOX_1 83 150 IPR001356 GO:0003677
Pral1824g00002 224 MobiDBLite consensus disorder prediction 39 90 - -
Pral1824g00002 224 Pfam Homeodomain 86 145 IPR001356 GO:0003677
Pral1824g00002 224 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Pral1824g00002 224 FunFam WUSCHEL-related homeobox 4 85 152 - -
Pral1824g00002 224 CDD homeodomain 86 147 IPR001356 GO:0003677
Pral1824g00002 224 PANTHER WUSCHEL-RELATED HOMEOBOX 4 9 224 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Pral1824g00002 224 MobiDBLite consensus disorder prediction 150 168 - -
Pral1824g00002 224 SUPERFAMILY Homeodomain-like 81 151 IPR009057 -
Pral1824g00002 224 Gene3D - 85 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1824g00002 Pral-Chr1824 11698 12907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1824g00002 9 172 Wox Gene Family AT1G46480 54.839 1.74e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral1824g00002 Homeodomain 4.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1824g00002 - - zju:107419981 261.922