Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1822g00007 ATGCTCCACCCACCACAATTCACCGCCAATAGCGCCTTCGACTTTAACCTCAACACCTCTTTTTCTTCCTTAACTTCCAATGAAACCGCCCACCTCTACTTCTACAACACCACCGTTGGCGGCGGTGGTGAGACCATATACGGCCTCTTCATGTGCCGGGGCGACGTCGACCAAGAGACCTGCCACCAGTGCGTCGTTGACTCAAGGACAGATTTAGAGTACTATTGCCGATTTTCGAAGGCGGCCGTAAACTGGCGTGGCTATTGCTTGGTTCGCTATTCTCAGCGCAACTTCTTCTCCACCGTCGATACAAAGCCTAAACTCAAAATGTTGAACCCTAACAACGTCTCGAACCAGGCAGGATTCATGAATGTATTGATGACTGTTATGAACCTGACGGCAGATGAAGCGGCGAAACCTGCTTTGATGAAAAAGAAGTTTGCGACGAACGCGGTGGTTGTAGATTTTCAAACTCTGTATGTGATGGTTCAGTGCACGCCGGACCTTTCGCCGGGAGATTGCAGGAGGTGTCTGAGTGGTGTGATCCGGAACCTTCCATGGTGTTGTGAGGGGAAGATCGGAGGAAGAATGTTTTATCCAAGTTGCTTCGCTCATTATGAACTGTATAAGTTCTTTCATTCTAAGCCTCCCCGGCCAGTAACGCTGCCGCCTCCGCCTCCTCCTCCTCCTCCGGCTCCATTAACTCCTCCAACTCCTTCAGATGTAAGAAGGAAAAGGAGATCAAGGACTATTGTGATAGCTGTGGCTTCTCCTGTTGGTGCTGTGATACTTCTATGTTTCGCCTTCTATTTGTCGAAGAATCAAATAAAGAAGATACGTATGGCTTTTCTCATGCAAAAATACTTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACGATTGAAGCAGCGACAAATAAGTTTTCACAGGAAAACGGTTTAGGTCAGGGTGGATTTGGACAAGTTTACAAGGGCATTCTTTCAAATGGTCAAGAAATAGCTGTAAAAAGACTCTCAAAAAGTTCTGGCCAGGGAGTAGAAGAATTTAAGAATGAGGTTTTATTAATAGCCAGACTCCAGCATAGAAATTTGGTGGCCTTGCTAGGATTTTGCATAGAAGAGCAAGAGAAAATTCTCATTTATGAATATGTTCCCAACAAAAGTCTTGATAATTTTCTATTTGGTTCGCAAAAAATCAAAGTACTAAATTGGGAGGAACGTTGTAAAATTATAGGGGGAGTTGCTCGAGGAATTCTCTACCTTCATGATTATGCTCGAGTTAAGATTATACATCGTGATCTCAAGCCAAGCAATATTTTGTTAGATAATGAAATGAATCCAAAAATTGCAGATTTTGGCATGGCTAGGATGGTTGGAATCAATGAAATTGAGGAAAACACAAGTAACATTGTTGGAACCTATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATGTTTTCAGTTTTGGAGTAATAGTATTAGAAATGATCAGTGGAAGAAAGATCACAAGCTCTCAGGATCAATCTCATGGCCTCCTAAACTATGCTTGGAATCAATGGATGGAAGAAAAGATATTAGAGGTATTGGATTCAAGCCTAAATGAACCTGAATCGTTGAATGAAGTGAACAAGTGCATCCAAATTGGGTTGTTATGCGTTCAAGAAAATCCAGAGGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTTAGCAATGATTCGATTCATTTGCCATTTCCACAAGAACCTGCATTCTTTCTGGAGGGCCAAATGGAGCTTAATACCGACAGTCAAGAATCTATTAATGAAATGTCTATAAGTGAATTCTATTCTCGATAG 1875 0.4224 MLHPPQFTANSAFDFNLNTSFSSLTSNETAHLYFYNTTVGGGGETIYGLFMCRGDVDQETCHQCVVDSRTDLEYYCRFSKAAVNWRGYCLVRYSQRNFFSTVDTKPKLKMLNPNNVSNQAGFMNVLMTVMNLTADEAAKPALMKKKFATNAVVVDFQTLYVMVQCTPDLSPGDCRRCLSGVIRNLPWCCEGKIGGRMFYPSCFAHYELYKFFHSKPPRPVTLPPPPPPPPPAPLTPPTPSDVRRKRRSRTIVIAVASPVGAVILLCFAFYLSKNQIKKIRMAFLMQKYFGSESNTLEPLQFSLATIEAATNKFSQENGLGQGGFGQVYKGILSNGQEIAVKRLSKSSGQGVEEFKNEVLLIARLQHRNLVALLGFCIEEQEKILIYEYVPNKSLDNFLFGSQKIKVLNWEERCKIIGGVARGILYLHDYARVKIIHRDLKPSNILLDNEMNPKIADFGMARMVGINEIEENTSNIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEMISGRKITSSQDQSHGLLNYAWNQWMEEKILEVLDSSLNEPESLNEVNKCIQIGLLCVQENPEARPSMATVVSYLSNDSIHLPFPQEPAFFLEGQMELNTDSQESINEMSISEFYSR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1822g00007 624 Pfam Protein kinase domain 314 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1822g00007 624 FunFam Cysteine-rich receptor-like protein kinase 25 106 211 - -
Pral1822g00007 624 MobiDBLite consensus disorder prediction 220 243 - -
Pral1822g00007 624 MobiDBLite consensus disorder prediction 220 238 - -
Pral1822g00007 624 Gene3D - 104 211 IPR038408 -
Pral1822g00007 624 Gene3D - 1 98 IPR038408 -
Pral1822g00007 624 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 389 590 - -
Pral1822g00007 624 ProSiteProfiles Gnk2-homologous domain profile. 104 211 IPR002902 -
Pral1822g00007 624 SMART serkin_6 313 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1822g00007 624 Gene3D Transferase(Phosphotransferase) domain 1 389 588 - -
Pral1822g00007 624 CDD STKc_IRAK 319 582 - -
Pral1822g00007 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Pral1822g00007 624 ProSiteProfiles Gnk2-homologous domain profile. 1 98 IPR002902 -
Pral1822g00007 624 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Pral1822g00007 624 Gene3D Phosphorylase Kinase; domain 1 274 388 - -
Pral1822g00007 624 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 620 - -
Pral1822g00007 624 SUPERFAMILY Protein kinase-like (PK-like) 296 607 IPR011009 -
Pral1822g00007 624 ProSiteProfiles Protein kinase domain profile. 313 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1822g00007 624 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 275 388 - -
Pral1822g00007 624 Pfam Salt stress response/antifungal 117 209 IPR002902 -
Pral1822g00007 624 Pfam Salt stress response/antifungal 6 95 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1822g00007 Pral-Chr1822 53581 57311 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1822g00007 7 599 Receptor kinase-like Gene Family AT4G05200 45.167 7.48e-177 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1822g00007 Pkinase 2.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1822g00007 - - pcin:129286093 960.674