Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1822g00004 ATGACTGTACCTAACCTCCATCTCATATTCTTCCTCAGCTTGCTTCAATATTTTGCCATAGCCAGAGCTGAAGCAGATGGCTCTATTTATATAGGCAATAAAGATGCTGTTTATATCCACCATGATTCTGATCCTCTTGATGGCGGCAAAGGGGGCTCAGCGTCCGAAGGAGGTAGAAAAGTCCGGTCCCGGATCATTATCGCGATGGTCATCCCAGTCGTTGTTACTGTCCTGCTGTCCTATTTCGTCATCTATTTGCTGCGAAGGAAGGCAAGGAGGAGATATGCCATTCTCAAAGAAAGCTTACACATATACATTGGTTTGGTTGGAACTGAACGTACTACTCTGGAGTCACTGCAATTCGATTTCACTACAATTGAAGCTGCAACAAACAGGTTTTCAGTTCAGAACAGGATAAGTCAAGGAGGATTTGGAGAAGGTACTCTTTCTAATGGACAGAAAATTGCTGTGAAGAGACTCTCCGCGAGCTCCGAACAAGGCACCCTGGGATTTAAGAATGAGATTTTACTAATGGCTAAACTTCAACATAGAAATCTAGTGACATTGTTGGGATTTGCTTACAAGAGCATAAGAAGATACTCGTTTGCGAATTTGCACCCCACAAAAGCCTCGACTACTTTCTCTTTGATTCTCAAGATCAACTCTTGTCAAATTGGTCCAGGCGCTTTAAAATCATTGAAGGGATCAAAACATCAATCCAAAGCTTTCCCATCGTGGAATGGCAAAAATGGTGGCAATAGATCAACACCAAGAAAGAACAAGGAGAATGGTTGGGACACAGCTTGGAACCAGTGGAGGGGAGGTGAGACGCCATTAGAAATAATCGATCCGAAGTTGAAAGAAAGTTGTTGTGAAGCAGAAGTGATGAAGTGCATCCAGATTGGATTATTGTGTGTTCAAGAGAAACCACAGTATAGGCCTCCCATGTCAAGAGTTGTTTCGTATTTAAGTAATCTTTCTGTGGAATTACCATTTCCTCGCGAGCGCGCATTTTATATTCATGGTAGGAGGGACCCAAATTCGGGTCATCCTTCTGCTTCTGCCAACAATTCCATTCCATCTTCTGTCAATGAAATGTCTATAACTTCATCTTTTCCTCGTTAG 1125 0.4258 MTVPNLHLIFFLSLLQYFAIARAEADGSIYIGNKDAVYIHHDSDPLDGGKGGSASEGGRKVRSRIIIAMVIPVVVTVLLSYFVIYLLRRKARRRYAILKESLHIYIGLVGTERTTLESLQFDFTTIEAATNRFSVQNRISQGGFGEGTLSNGQKIAVKRLSASSEQGTLGFKNEILLMAKLQHRNLVTLLGFAYKSIRRYSFANLHPTKASTTFSLILKINSCQIGPGALKSLKGSKHQSKAFPSWNGKNGGNRSTPRKNKENGWDTAWNQWRGGETPLEIIDPKLKESCCEAEVMKCIQIGLLCVQEKPQYRPPMSRVVSYLSNLSVELPFPRERAFYIHGRRDPNSGHPSASANNSIPSSVNEMSITSSFPR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1822g00004 374 MobiDBLite consensus disorder prediction 349 374 - -
Pral1822g00004 374 Gene3D Transferase(Phosphotransferase) domain 1 251 331 - -
Pral1822g00004 374 MobiDBLite consensus disorder prediction 239 254 - -
Pral1822g00004 374 Gene3D Phosphorylase Kinase; domain 1 110 200 - -
Pral1822g00004 374 SUPERFAMILY Protein kinase-like (PK-like) 112 196 IPR011009 -
Pral1822g00004 374 MobiDBLite consensus disorder prediction 342 374 - -
Pral1822g00004 374 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 260 352 - -
Pral1822g00004 374 MobiDBLite consensus disorder prediction 239 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1822g00004 Pral-Chr1822 22200 27460 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1822g00004 272 344 Receptor kinase-like Gene Family AT4G23190 39.726 4.09e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1822g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1822g00004 - - vum:124825842 216.468