Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1816g00004 ATGGGGAGAATGGGACAAGAAGAACCAGATTTGAAAACCCAGTTAGTTCTGGACATCTGCTCCATCTCTACTCGCTCCGTGGTATGCGTTCATAGGCTTCTCTCAAACCCAGCTAAGCCAACTTCTTTCATCGATTGGTATCACATCCTTGGAGTGGAAGAAAATGCAGGGCCGAATAGCATTCGCAAGCGATACCATAAGCTGGCTTTGCAGCTTCACCCAGATAAGAATAATCATCCCAAGGCTGAAATTGCCTTCAAGCTTGTCTCTGAGGCATATACATGTTTGTCTGATGCTGCGAAGAGAAAAGCCTTTGAGCTAGAGAGATGGAAAAACTTCTGCTTTGAGTGCAAAAGGATCCCATACTCATCATCTGGCAGTGTCCCTCGCAATTCCCATGGTGGTTCAAGTTCCAAGGTATGGAATATTATCAGCAGGTCAAGATCCTACAAGTTCTGGAGAAATATAAAGGAAATTAGAGAAAGATTCAAGGAGGAGGCTAAGGTGATAGAGAACTGTTTGAGGGCAAATTCAATGCCCAGGAAAGAATCTCCACTTTTCAATCCAGTAGATTATTTAGAAAGAAGCAGGTCTCATCGCAGAACAGAGGGAGAAACCCCCGTGTTCAACCCATCAGACTACTTGTACCAAGGCTATCCTCATCTGAGAAGCCAAATTTTCAAGAATTCCGATAAGTTTTGGTACTTGCAGACGGAAAATAGTATTCTGCATGACAGGGGGGGAGCATCCAAGTATGACTCTCCAGTTTTTGAGGTCAGACCAGAAAGGAGAATGTTTACCAGCAAATTTGCTTATGTCCCGTCATGA 828 0.4396 MGRMGQEEPDLKTQLVLDICSISTRSVVCVHRLLSNPAKPTSFIDWYHILGVEENAGPNSIRKRYHKLALQLHPDKNNHPKAEIAFKLVSEAYTCLSDAAKRKAFELERWKNFCFECKRIPYSSSGSVPRNSHGGSSSKVWNIISRSRSYKFWRNIKEIRERFKEEAKVIENCLRANSMPRKESPLFNPVDYLERSRSHRRTEGETPVFNPSDYLYQGYPHLRSQIFKNSDKFWYLQTENSILHDRGGASKYDSPVFEVRPERRMFTSKFAYVPS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1816g00004 275 CDD DnaJ 45 98 IPR001623 -
Pral1816g00004 275 PANTHER BNAC03G44070D PROTEIN 23 239 - -
Pral1816g00004 275 SUPERFAMILY Chaperone J-domain 37 108 IPR036869 -
Pral1816g00004 275 SMART dnaj_3 44 101 IPR001623 -
Pral1816g00004 275 PRINTS DnaJ domain signature 118 137 IPR001623 -
Pral1816g00004 275 PRINTS DnaJ domain signature 47 65 IPR001623 -
Pral1816g00004 275 PRINTS DnaJ domain signature 65 80 IPR001623 -
Pral1816g00004 275 PRINTS DnaJ domain signature 81 101 IPR001623 -
Pral1816g00004 275 Pfam DnaJ domain 45 105 IPR001623 -
Pral1816g00004 275 ProSiteProfiles dnaJ domain profile. 45 109 IPR001623 -
Pral1816g00004 275 Gene3D DnaJ domain 44 169 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1816g00004 Pral-Chr1816 26638 28075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1816g00004 45 106 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 9.52e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1816g00004 - - gmx:100801809 374.4