Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1815g00004 ATGTATTCTTTTATTCCATACAGTTGTTTTCTACCCAGAGGGATAGGCGGTCTTGATAAACTTGGTAAATTAGACTTGTCCAGTAATTACTTCAAAAGACCTATTCCTTCCAACATATTCAACATTTCAACATTAACATTTTTAAACCTTGCCAGCAACTCCCTCTCTGGCGTTCTCCCATCATATTTAGGAAATGGCCTTCCCAATTTGAAGAAGTTAGGGTTGGATGGGAATGAACTAACCGGACAAATTCCAAACAGCATATCAAATGCTTCTAAGCTCATTGCATTACACTTGTCATCGAATAAACTTATCAAAGCTATACCCAATGTAATTGGAAATTTAACAAGCTTGATTGACTTAGCTTTGGATGGGAATGAATTGACTGGTTTGATTCCATACACATTTGACAAATTACAGAGCCTTCAACATTTAAGCCTGAGCAACAACAAATTACAAGGTTCCATTTTAAATAACCTTTGCCAACTCAAAAGTCTAAGTGAGTTGAATCTTGCCAACAATATGTTTTTGGGAGCAGTTTTGGGATGTCTTGGGAATACTTCTTTGCAAAAGTCGAATTTTAGCTCTAACAAATTTGTTTCTCATATACCCTCTTCTCTTTGGAGTCTCAAAGATTTATTGGTTTTAGATATATCCTCCAATGCATTGAGTGGAATAATTTCACTAGAGGTATCAAACTTGAGAGCAATTATACTATTAGATTTGTCAAGAAACCAAATTTCAGGAAGCATCCCTAAAACAATGGGTGGGTTGCAAACTTTGCAAAACTTATCTTTGGCTCACAACAAATTACAAGGGCCTATACCTGAATCATTAAGCAACATGGTCAATATTGAGTCAATAGATCTTTCTCATAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCACTACACTATCTTAAATCTATTAATCTTTCCTACAATTTATTGGATGGAGCAATTCCAAATGGTGGTCCTTTTCAAAATTTCACTGCTCAATCTTTTATGATGAATAAGGGTCTTTGCGAGAAATCCTACCTACACGTCCAACCATGTAGGAAAGGAAACAAGCACATAACAAATAAAGTGATGTTGGTGATAAAATGCTTAGTGCCTGTCATGGTTGTTATTTTGGTTGTTACAGGCATTGTCTTTCTAAAGCATAATAGAGATGATGCTAACTATGCAACCAAAAGGGATTTAACAAATTTCGATGCACCAACTAGGATATCCTATTATGAGCTTTTACAGGGAACAAACGGATTTGATGAAAGGAATCTTCTTGGCCTTGGAAGTTTTGGATCAGTATACAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTGTTTAACATAGACATGGAAGAAGCATTGAGAAGTTTTGATATTGAATGTGTTGCCATGTGTAATTTACGCCATCGTAATCTCATTAAGATCATTAGTAGTTGCTCAACTGATGATTTCAAGTCTCTAATCATGGAATTCATGTCAAATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCTTGCAAAGGTTGAATATAATGGTTGATGTGGCAGCTGCATTAGAGTATCTTCATCATGGTAGTTCTACTCCGATTGTTCATTGTGACATAAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATAGCTAAACTATTAGGTGAAGGACAGTTGCAAACTTATACAAAAACATTGGCTACAGTTGGCTATATGGCACCAGAGTATGGCTCAAAAGGAGTAGTTTCTTTCAAAGGAGATGTGTATGGCTATGGTATCATGCTAATGGAGATGTTTACAAGGAAGAAGCCAACTGATAAAATGTTTGTTGAAGGTCTTGATTTGAAAGATTGGGTTAGCAAATCAATACCGCATTCAATCATCGATATTCTTGATGTCAATTTGCTGCATGAAGAGAATCCAAATATCAACAATATATTACCACATATATCATCAATTTTTGAGTTAGCATTAAGTTTTTGCACTAAATCACTAGAAGCACAAATTATGATGACTGATGTTGTGGTCTCTTTGAAAAAGATAAGGTCACATTTGCATAAAATGTTAGAGATGCACCACTAG 2136 0.3525 MYSFIPYSCFLPRGIGGLDKLGKLDLSSNYFKRPIPSNIFNISTLTFLNLASNSLSGVLPSYLGNGLPNLKKLGLDGNELTGQIPNSISNASKLIALHLSSNKLIKAIPNVIGNLTSLIDLALDGNELTGLIPYTFDKLQSLQHLSLSNNKLQGSILNNLCQLKSLSELNLANNMFLGAVLGCLGNTSLQKSNFSSNKFVSHIPSSLWSLKDLLVLDISSNALSGIISLEVSNLRAIILLDLSRNQISGSIPKTMGGLQTLQNLSLAHNKLQGPIPESLSNMVNIESIDLSHNYLSGVIPKSLESLHYLKSINLSYNLLDGAIPNGGPFQNFTAQSFMMNKGLCEKSYLHVQPCRKGNKHITNKVMLVIKCLVPVMVVILVVTGIVFLKHNRDDANYATKRDLTNFDAPTRISYYELLQGTNGFDERNLLGLGSFGSVYKAILPNEKIVAVKVFNIDMEEALRSFDIECVAMCNLRHRNLIKIISSCSTDDFKSLIMEFMSNGSLDRWLYSHNYCLDILQRLNIMVDVAAALEYLHHGSSTPIVHCDIKPSNVLLDEDMVAHLSDFGIAKLLGEGQLQTYTKTLATVGYMAPEYGSKGVVSFKGDVYGYGIMLMEMFTRKKPTDKMFVEGLDLKDWVSKSIPHSIIDILDVNLLHEENPNINNILPHISSIFELALSFCTKSLEAQIMMTDVVVSLKKIRSHLHKMLEMHH 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1815g00004 711 SUPERFAMILY Protein kinase-like (PK-like) 405 650 IPR011009 -
Pral1815g00004 711 SUPERFAMILY RNI-like 10 325 - -
Pral1815g00004 711 Gene3D Phosphorylase Kinase; domain 1 387 499 - -
Pral1815g00004 711 SMART LRR_sd22_2 210 231 - -
Pral1815g00004 711 SMART LRR_sd22_2 258 281 - -
Pral1815g00004 711 SMART LRR_sd22_2 139 162 - -
Pral1815g00004 711 SMART LRR_sd22_2 282 308 - -
Pral1815g00004 711 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 500 709 - -
Pral1815g00004 711 SMART LRR_typ_2 139 163 IPR003591 -
Pral1815g00004 711 SMART LRR_typ_2 234 258 IPR003591 -
Pral1815g00004 711 SMART LRR_typ_2 18 42 IPR003591 -
Pral1815g00004 711 SMART LRR_typ_2 67 91 IPR003591 -
Pral1815g00004 711 SMART LRR_typ_2 282 305 IPR003591 -
Pral1815g00004 711 SMART LRR_typ_2 115 138 IPR003591 -
Pral1815g00004 711 Gene3D Ribonuclease Inhibitor 6 355 IPR032675 -
Pral1815g00004 711 Pfam Protein kinase domain 426 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1815g00004 711 Gene3D Transferase(Phosphotransferase) domain 1 500 710 - -
Pral1815g00004 711 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 108 358 - -
Pral1815g00004 711 PANTHER OS04G0122200 PROTEIN 16 109 - -
Pral1815g00004 711 Pfam Leucine rich repeat 260 319 IPR001611 GO:0005515
Pral1815g00004 711 Pfam Leucine rich repeat 118 175 IPR001611 GO:0005515
Pral1815g00004 711 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Pral1815g00004 711 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 12 107 - -
Pral1815g00004 711 FunFam Serine-threonine protein kinase plant-type 404 499 - -
Pral1815g00004 711 ProSiteProfiles Protein kinase domain profile. 424 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1815g00004 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Pral1815g00004 711 SMART serkin_6 424 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1815g00004 Pral-Chr1815 206707 209937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1815g00004 18 705 Receptor kinase-like Gene Family AT3G47570 36.968 5.94e-136 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral1815g00004 Pkinase 5.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1815g00004 - K13420 pcin:129285519 975.311