Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1815g00003 ATGATTCCAAAGTCCTTAGAGTCACTTCTCTATCTTAAATCCATTAATCTTTCCTACAATCTTTTGGATGGAGAAATTCCAAGTGGTGGTCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTCTGTGGAAAACCTCACCTAGAAGTAAAACCATGTAGGAGAGGAAACAAGCACAAATTAGATAAAGTGATGCTGGTTGTAAAATGCTCAGTGCCTGTCATGGTTGTCATTTTGGTTGTTACAGGCATTGTCTTTCTAAAGCATAATAGAGATAATGCCAATTATTCAACCAAAAGGGATTTAACAAACCTGGATGCACCACCAAGGATATCCTATTATGAGCTTCTGCAAGGAACAAATGGATTTGATGAGAGCAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATACAAAGCAGTTCTTCCAAATGAAAAGATAGTTGCTGTTAAAGTATTTAACATAGACATGGAAGAAGCATTGAGATGTTTTGATATTGAATGTGCTGCCATATGCAATCTACGCCACCGTAATCTCATTAAGATTATTAGTAGTTGCTCAAATGATGATTTCAAGTCTCTAATCATGGAATTCATGCCAAATGGAAGCCTTGATAGATGGTTGTACTCTCATAACTATTGTTTAGATATCTTGCAAAGGTTGAATATAATGGTTAATGTGGCAGCTGCTTTAGAGTATCTTCATCATGGTACTTCTACTCCGATTGTTCATTGTGACATAAAACCAGGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTCAGTGATTTTGGTATAGCTAAACTATTAGGTGAAAGGCAATTGGAAACTTATACAAAAACATTGGCGACAATTGGCTATATGGCACCAGAGTATGGATCAAAAGGCGTGGTTTCTTTCAAAGGAGATGTGTATAGTTATGGTATCATGCTAATGGAGATGTTTACAAGGAAGAAGCCAACCGATGAAATGTTTGTTGAAGGTCTTGATTTGAAAGATTGGGTTAGAAAATCAACGCCACATTCAATCATCAACATTCTAGATGTTAATTTGCTGCAGAAAGGGAATCCAAATATCAGCAACATATTACCCCATATGTCATCAATTTTTGAGCTGGCATTAAATTGTTGCATTGAATTACCTGAAGCACGAATCATGATGACTGATGTTATGGTCTCATTGAGAAAGATAAGAGCAAAGGTTCTGGCTCTGTCCAAGTTGCGCTGTGTTGCCTGA 1251 0.3669 MIPKSLESLLYLKSINLSYNLLDGEIPSGGPFQNFTAQSFMMNKDLCGKPHLEVKPCRRGNKHKLDKVMLVVKCSVPVMVVILVVTGIVFLKHNRDNANYSTKRDLTNLDAPPRISYYELLQGTNGFDESNLLGSGSFGSVYKAVLPNEKIVAVKVFNIDMEEALRCFDIECAAICNLRHRNLIKIISSCSNDDFKSLIMEFMPNGSLDRWLYSHNYCLDILQRLNIMVNVAAALEYLHHGTSTPIVHCDIKPGNVLLDEDMVAHLSDFGIAKLLGERQLETYTKTLATIGYMAPEYGSKGVVSFKGDVYSYGIMLMEMFTRKKPTDEMFVEGLDLKDWVRKSTPHSIINILDVNLLQKGNPNISNILPHMSSIFELALNCCIELPEARIMMTDVMVSLRKIRAKVLALSKLRCVA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1815g00003 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Pral1815g00003 416 SMART serkin_6 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1815g00003 416 Gene3D Ribonuclease Inhibitor 1 66 IPR032675 -
Pral1815g00003 416 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Pral1815g00003 416 SUPERFAMILY Protein kinase-like (PK-like) 105 399 IPR011009 -
Pral1815g00003 416 Gene3D Transferase(Phosphotransferase) domain 1 203 411 - -
Pral1815g00003 416 Gene3D Phosphorylase Kinase; domain 1 89 202 - -
Pral1815g00003 416 PANTHER OS04G0122200 PROTEIN 2 406 - -
Pral1815g00003 416 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 203 411 - -
Pral1815g00003 416 Pfam Protein kinase domain 128 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1815g00003 416 ProSiteProfiles Protein kinase domain profile. 127 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1815g00003 416 FunFam Serine-threonine protein kinase plant-type 107 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1815g00003 Pral-Chr1815 110165 117543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1815g00003 2 411 Receptor kinase-like Gene Family AT3G47570 38.724 2.47e-96 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral1815g00003 Pkinase 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1815g00003 - K13420 pcin:129285519 611.298