Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1812g00005 ATGGCTGCAGCAGCTGTGGGACAAGCATTGCTCTCTGCTTCTTTGCAGACCTTACTGGAGAGGATTACCTCCAGCGAGTTTCGAGATTTCATGAAAAACAGAAAGTTGAATGTATCTCTCTTGGATGAGTTGAAGATGACTTTGTTGATGCTTGATGCTATCCTCAATGATGCAGAAGAGAAGCAGATTACCAATGATGGAATCAATAAATGGCTTGAAGAACTGAAAGATGCTGTTTATGATGCAGAGGATTTACTGGATGAAATCCACACGGAGTCTCTAAGATGCAAGATGAAGAAAGATTCTCAAGGTGTCACAAACAAGGTGAGATCCTTCTTTTCTCCTTCTTTTGGTCAATTTTATTTGGAGATGAACTCCAAGCTAGAAGCAACATCTCGAAGGCTTGAAAACTTTGTCAAACAAAAGGATATCCTTGGTTTGCAAAGTGTTAGCACGAGAGGGCATAAAACACCTACAACATCATTGGTAAATGAATTTGTTGTGGTTGGTAGAGAGGATGATAAGGAGAAACTATTGAAAATGCTTCTGTGTGATGAAGATCCGAAGGGTAATGCTATAGGAGTGATCACTATTTGGGGTATGGGAGGCTTGGGTAAAACTACCCTTGCACAACTCCTTTACAATGATAAGACTGTCCAGGACAATTTTGATTTAAAGGTTTGGGCCTGTATTTCAAATGATTTTAACCTATTCAGGTTGACCAAAAATCTTGTTGAGTCCATCACTTCAAAAGTCTATAATAGCACAGATATAGACTACCTTCGTGTTAAATTAAGAAATAGACTAAGTAATAAAAAGTTTTTGATAGTGTTGGATGATCTATGGAACGAAAAGTATAGTGATTGGGATGATCTCATAACTCCTTTTCACAGTGGAAGAAGGGGAAGCAAGATCATCATAACAACTCGCCAGCAAAGAGTTGTTGAAATCACACATACATTTCCCGTACATAAATTGAGTTGTCTCTCAGATGATAACTGTTGGTTTTTACTCTCCAAGCATGCATTTGCAAATGAAGATCCAAATAAATATCCACAGCTAGAAGCAATTGGAAGAAAAATTGCAAGAAAATGTAGTGGCCTTCCCATTGCTGCTAAAACAATAGGAGGTCTTTTACGTTCAAAAGTGGATGCAACGGAATGGAATAAAATTCTTAATAACAACCTGTGGGACATACCAAATGATGATGTTTTACCAGCTTTGCGTCTGAGTTATCTCGCTCTTCCATCACATTTGAAGAAATGTTTCGCTTATTGCTCAATTTTTTCGAAAGATCTGTTGTTGGAGAAAAAGAAATTGGTCTTGTTATGGATGGCTGAAGGCTTTGTTCCTCAACACTCCCATGGGAAGAAAACATTGGAGGCAAAAGCAGATGAGTGCTTCAATGAATTATTGTCTAGGTCATTCATTCAACAATATGAAGGTGATCCAAGAAAGTTTTTGATGCATGATCTCATCAATGATTTAGCCAAAGTTGTATCGGGAAAGAGTTGTCTATGGTTTGAAGGCAATGAAATTCCAAAAACTCTTCGTCATTTATCATATACTAGAAAACGGTATGATGGTGCCAAAATGTTCGAGAATTTTGATCAGTTAAATTGTTTGAGGACTTTTTTACCTCAATCTAAGTATGGCTGGGCGTTTCCATCCTATTTGACTGGAAAGGTGATACATGATTTGTTGCCGAGATTAAAACGCTTGAGAGTATTATCTTTGTCTTGTTATGACAATGTCAATGAGTTGCCTGATTCAATTGGTGATTTGCAGCATTTGAGATATCTTGACCTTTCCTACACTCCAATTAGAAGGTTGCCTGATGCATTTTTTAAACTTCACAATCTGCAAACCTTGCTTTTATCATATTGTAGGAATTTCATTGAATTGCCAGAAAAGATAAAAAATCTTATTAATCTACGTCACCTAGACATTAGCGGCACAGCTTTGGAAGAGATGCCAACACAAATTACAGAATTACAAAATCTTCAAAGTTTGAGTAGCTTTATGGTGGGCAAACTATCAAATGGATTAGGAATTAAAGAGTTAAACAAACTTCCTCATCTGCAAGGTAAACTTTCCATTTTGAAGCTACAAAATGTTGTGGATTCAGAGGATGCTTTAGATGCAAACTTGAGGAGGAGAGAGAAAATTGAGGATTTAGTGTTAAAATGGGACGGTGATGATACTCAAGATTCACAGATTGTGAAAATGTTACTTGACATGCTTCAACCTTCAACAAATTTACAAAGACTGACGATAGACTATTATGGTGGCACTAGTTTTCCAAAGTGGGTGGGTGATTCTTCATTTACATATATTACCTTTTTATCTGTCAGTAACTGCAAATATTGCTTTTCACTCCCACCGTTTGGACAATTACCTTCTCTCAAAGAGCTCTTGATTAGAAGAATGGGATTAGTACAGATAATTGGGCGTGAGTTCTACTACAACAGAGTTCAGCCCTCTTCATTTCAACCATTTCCATTATTGGAAATTCTGGAATTTGAAGATATGCCAGTTTGGGAGGAGTGGATACCATTTGAAGGTGAAGCTGCCAAATTCCCTTTTCCTCATCTTAGACAACTGCGTTTATCTTATTGTCCTATGTTGAGGGGAGACATGCCTGTGAAACTACCATCATTGACAAAGGTTTATATATCTAATTGTGAACAGTTGGAGGCAAAATCATTATCTTCGCAATGGATCACATCTATTGAAGAGTTAAAAATCTTACAAGGGGGACAAGGTTTATTGAGAGCCCTTGATGATTATTCTCTCAGCTCTCTAAAACATCTGACAATTCAAAGGTGTTACAATTTGCAATGTTTGCCGAGAATGACAGTGAACTGCCACTGTCTCCAAGAGTTGTTTCTCTTTGGTGCCCCATCAATCATGTTCTTCCCAACTGACAGTCTACCCACTTCTTTACAACGACTTCTAATTCAAGACTGTGAGAAATTAGAGTTCATGCCTCAGGAATCTTGGCGAAGCCAAACATCAATTGAAGAATTGATGATTGATAATAGCTGTCATTCCTTGATATCCTTTCCATTAGATTGTTTTCCCAGGCTTAAAAAACTTGTAGTTTTTCAATGTCATAATTTGGAGACCTTTACAAATGTTGGGAGGTCCAATCTTTCCTTAGAAAAGTTAGCGGTCCACCATTGTCAAAAACTTGGATCAATGTCAGAAGTACATGTTAATTCCCTTGCCAGCCTTCAATTCTTTTCTCTTGAATGGCTTCCAAATTTGGAATCATTACCTCAATGTGGCTTGCCTTCTAACTTGCGATATTTGATCATTCGTGGCTGCAATGGACTATCTCCAATACCTTTTGAAAATTGGGGCTTTCATCGTCTGACTTCTTTGTCTCAGTTTGAGGTTGAAGGTAGTGGAATTGAAAATATTCTCCAGAATTTACTGAAGAATCAAATGATGCCCACTTCTCTTGTGCGTATGGTCATCTCTGATGTCCACAATCTTGAATTGTTAGATGGAAAAGGGCTTCACCGCCTTACTTCTCTAAAGAGGCTCTCCATTTATGGCTGTCCAAAGCTTGAATCCTTGCCAGAAGATTGCCTGCCATCCTCTCTTTTGTTTCTGAATATTTGGAGCTGTCCTAAATTAGAAGCAAGATACCATTTTCAAGGAGGCAGACACTTGTCCAAGATCACTCATATTCCCACCATAATAATTAATGGCGAATACCATGATCCTTGGTACATTCCATCTAAAGGTTTGAGGAGATGA 3768 0.3787 MAAAAVGQALLSASLQTLLERITSSEFRDFMKNRKLNVSLLDELKMTLLMLDAILNDAEEKQITNDGINKWLEELKDAVYDAEDLLDEIHTESLRCKMKKDSQGVTNKVRSFFSPSFGQFYLEMNSKLEATSRRLENFVKQKDILGLQSVSTRGHKTPTTSLVNEFVVVGREDDKEKLLKMLLCDEDPKGNAIGVITIWGMGGLGKTTLAQLLYNDKTVQDNFDLKVWACISNDFNLFRLTKNLVESITSKVYNSTDIDYLRVKLRNRLSNKKFLIVLDDLWNEKYSDWDDLITPFHSGRRGSKIIITTRQQRVVEITHTFPVHKLSCLSDDNCWFLLSKHAFANEDPNKYPQLEAIGRKIARKCSGLPIAAKTIGGLLRSKVDATEWNKILNNNLWDIPNDDVLPALRLSYLALPSHLKKCFAYCSIFSKDLLLEKKKLVLLWMAEGFVPQHSHGKKTLEAKADECFNELLSRSFIQQYEGDPRKFLMHDLINDLAKVVSGKSCLWFEGNEIPKTLRHLSYTRKRYDGAKMFENFDQLNCLRTFLPQSKYGWAFPSYLTGKVIHDLLPRLKRLRVLSLSCYDNVNELPDSIGDLQHLRYLDLSYTPIRRLPDAFFKLHNLQTLLLSYCRNFIELPEKIKNLINLRHLDISGTALEEMPTQITELQNLQSLSSFMVGKLSNGLGIKELNKLPHLQGKLSILKLQNVVDSEDALDANLRRREKIEDLVLKWDGDDTQDSQIVKMLLDMLQPSTNLQRLTIDYYGGTSFPKWVGDSSFTYITFLSVSNCKYCFSLPPFGQLPSLKELLIRRMGLVQIIGREFYYNRVQPSSFQPFPLLEILEFEDMPVWEEWIPFEGEAAKFPFPHLRQLRLSYCPMLRGDMPVKLPSLTKVYISNCEQLEAKSLSSQWITSIEELKILQGGQGLLRALDDYSLSSLKHLTIQRCYNLQCLPRMTVNCHCLQELFLFGAPSIMFFPTDSLPTSLQRLLIQDCEKLEFMPQESWRSQTSIEELMIDNSCHSLISFPLDCFPRLKKLVVFQCHNLETFTNVGRSNLSLEKLAVHHCQKLGSMSEVHVNSLASLQFFSLEWLPNLESLPQCGLPSNLRYLIIRGCNGLSPIPFENWGFHRLTSLSQFEVEGSGIENILQNLLKNQMMPTSLVRMVISDVHNLELLDGKGLHRLTSLKRLSIYGCPKLESLPEDCLPSSLLFLNIWSCPKLEARYHFQGGRHLSKITHIPTIIINGEYHDPWYIPSKGLRR 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1812g00005 1255 Pfam Rx N-terminal domain 11 103 IPR041118 -
Pral1812g00005 1255 FunFam Probable disease resistance protein At1g61300 152 320 - -
Pral1812g00005 1255 Gene3D - 19 124 - -
Pral1812g00005 1255 Coils Coil 41 61 - -
Pral1812g00005 1255 SMART LRR_typ_2 595 618 IPR003591 -
Pral1812g00005 1255 SMART LRR_typ_2 642 665 IPR003591 -
Pral1812g00005 1255 SUPERFAMILY L domain-like 489 915 - -
Pral1812g00005 1255 Gene3D - 411 499 IPR036388 -
Pral1812g00005 1255 Gene3D - 152 321 IPR027417 -
Pral1812g00005 1255 Pfam NB-ARC domain 171 393 IPR002182 GO:0043531
Pral1812g00005 1255 PRINTS Disease resistance protein signature 195 210 - -
Pral1812g00005 1255 PRINTS Disease resistance protein signature 616 632 - -
Pral1812g00005 1255 PRINTS Disease resistance protein signature 365 379 - -
Pral1812g00005 1255 PRINTS Disease resistance protein signature 268 282 - -
Pral1812g00005 1255 Gene3D Ribonuclease Inhibitor 506 849 IPR032675 -
Pral1812g00005 1255 Gene3D - 328 410 IPR042197 -
Pral1812g00005 1255 Gene3D Ribonuclease Inhibitor 1072 1237 IPR032675 -
Pral1812g00005 1255 PANTHER DISEASE RESISTANCE PROTEIN RP 43 895 IPR044974 GO:0006952
Pral1812g00005 1255 Coils Coil 68 92 - -
Pral1812g00005 1255 Gene3D Ribonuclease Inhibitor 856 1052 IPR032675 -
Pral1812g00005 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 426 IPR027417 -
Pral1812g00005 1255 Pfam Leucine rich repeat 573 630 IPR001611 GO:0005515
Pral1812g00005 1255 SUPERFAMILY L domain-like 913 1216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1812g00005 Pral-Chr1812 63561 68304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1812g00005 193 704 WRKY Transcription Factor Family AT5G45050 21.340 1.49e-09 60.8