Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1812g00004 ATGGAGTTAGCTGCCAAGGTGGGAGAAGCACTGATCTCTGCTTCTGTGCAGACCTTACTCGACCGGATCTCCTCAAGCGAGTTTCGAGATTTCATGAAAAGTAGAAAGCTCGATGTCTCTCTCTTGGATCAGCTGGAGACAACTCTGTTGATGCTTGGTGCTGTGCTCAATGATGCGGAAGAGAAGCAGATCACGAATGATGCAGTCAAGAAATGGCTCGAAAAGTTGAAAGATGCTGTCTATGATGCAGAGGATTTACTCGATGAAATCAACACCGAGTCTCTCAGATGCAAGGCGGATAAAGATTCTCAAAATTTTGTTAACAAGGTGCACTCTTTCCTTTCCTCTTCTTTTGGTCAATTTAACCGAGAGATGAACTCCAAGCTAGAAAAAGCATCCCGAAGGCTTGAACACTTTGCCAAACAAAAGGATATCCTTGATTTGCAAAGTGTTAGCTTGAAAGCGCATAAAACAGCTTCTACATCACTGGTAAATGAATCTCTTGTGGTTGGTAGAGAGGATGATAAGGAGAAACTATTGAAAATGCTTCTGTGTGATGAAGATCCAAAAGGTAACGCTATAGGAGTGATCACTATCTTGGGTATGGGTGGCCTGGGCAAAACCACCCTTGCTCAACTCCTTTACAATGACAAAAAGGTGCAAGACCATTTTGATTTGAACGCTTGGGCATGTGTTTCAGATGATTTTAATGTTGTCGAGGTGACTAAGAGTCTTGTTGAGTCTGTCACTAAAAAGGTCTATGATAGTAAAAATCTAGATTTCCTTCGTGTTGAATTAAGAAACAGTTTGAGCAATAAAAAGTTTCTGATTGTGTTGGACGACTTATGGAATGAAAAATACAGTGATTGGGATGATCTCATAACTCCTTTTCATAGCGGAAGAACGGGAAGCAAAATTATTGTGACAACTCGTGAACCAAGAGTTGTTCAAATCACACATACATTTCCCGTACATGAATTGAGTCGTCTCTCAGATGATAACTGTTGGTTTTTACTCTCCAAGCATGCATTTGGAAATGAAGATCCAAACAAACATCCAGAGCTAGAAGCAATTGGAAGGCAAATTGCGAAAAAATGTGGTGGTCTCCCAATTGCTGCTAAAACAATAGGAGGTCTTTTGCGTTCAAAAGTGGATGCAAAGGAATGGAATAAAATTCTGAATAGCAAGCAGTGGGAGATACTAAATGCTAATGTTCTTCCTGCTTTGCATTTGAGTTATCTCTATCTTCCATCACATTTGAAAAAATGTTTTGCTTATTGCTCCATTTTTCCAAAAGATCTTGTGTTGGAGAAAAAGAAATTGGTATTGTTATGGATGGCTGAAGGTGCTGTGCAACAATTCCATGGGGAGGAGACATTAGAGGCAGAAGTAGAAGATTATCTCAATGAATTACTATCACGGTCATTCTTTCAACAGTATGGTAGTAATCCAAAAAAGTTTGTCATGCACGATCTCATCAATGATTTAGCCAAATTTGTAGCTGGAAAGAATTATGTTCAATTTGAGGAAAATGATGTCCCAAAATCTGCACGACATTTATTGTTTTCCCAAAAAGAATATAACAGCTATAAAGAATGTGAGAGCTTTTGTCATCTAAACTATTTGAGGACTCTTTTGACACAAAATGAATTTAGAGATTGGAATCCATCATGTGTTTTGTCCAAAAAGTTGCTCAATGGTTTGTTGACAAAACTAAAATGCCTAAGAGCATTGTCCTTATCAGGGTACGAAAATGTCGTTGAGGTACCAAATTCAATTGGCAATGTGCTACATCTACGATATCTCAACCTTTCCTATACTTCAATTAGAAGTTTGCCTGATGCAGTCTTTACCCTTTACAATTTGCAGACGTTGCTTTTATCAAATTGTGTGAATTTTAATGAATTACCAGAGAAGGTAGAAAAGCTTGTTAATTTACGTCATCTAGACATTAGTGCAACTGCTTTAAAAGAGATGCCCACACAAGTTGCAAAACTACAAAATCTTCAAAATTTGAGTACCTTTATCGTGGGCAAGCAGCCGGATGGATTGGCAATTAAAGAGTTGAAAAGGCTACCTCATCTGCAAGGTAAACTTTCCATTTCAAATCTACAAAATGTTGTTGATTCTACGGATGCTTTGGAGGCAAACTTGAAGAATAGAGAAAAGATTGCGGAGTTAGTGTTGGAATGGGATTGCGATGCTTCAGATTCACAAACTGTGAAAAATATACTGAACATGTTGCAACCTTCTACAAATTTAAAGAAATTGACCATCAACCATTATGGAGGCACCAGGTTCCCTGGTTGGATGGGAGATTCATCATTTATAAACATCACCAATTTATGTGTGAGTGATTGCAGTAATTGTGTTTTGCTCCCACAATTTGGAGAACTACCTTCTCTCAAAGAGCTCTCGATTGGTGGAATGGGATCAGTGCATACTGTTGGACATGAATTCTATTGTAGCAAGCCCGAGTACTCTTCATTTCAGCCATTTCCATCCTTGGAGATTCTCATATTTGAAAATATGCCTATTTGGGAGGAATGGATGTTGTTTGATGGTGAAGGTGTCAAATTTCCTTTCCCTAGACTCAAAAGTTTGAGTTTGTGTGATTGTCCCATACTGCGGGGAGACATGCCCCACAACCTTCCATCATTGACAAATGTTTCTATATCAAACTGCAAACAATTGAAGGCAAAATCAGCAACTTTGCAGTGGATTACATCTATTCAAGAATTAAACATTGAGCGAGGTGAACAGGGGTTATTAAGAGCATTTGATGATTTATCTCTGGACTCTTTGAAATTTCTAACAATTGGGAAGTGTGATAGCTTGCGGTCTTTGCCAAGAATGATAATGGGTAGCCGTTGTCTTCAAATGCTGTTTCTTGGAGATATCCCATCCATCACGTCCTTCCCAATTGATGGTTTGCCCACTTCTTTGCGACGTCTTGACATTGGCAATTGTGAGAAATTAGAGTTCCTACCTCAGGATTCTTGGCAAAACTACACATCACTTGAAGACTTGAGAATTGATAATAGTTGTCCTTCCTTGAAATCTTTCCCATTAGGTTGTTTTCCCAAGCTTAAATGGCTTGACATTTGCAGCTGTCATAATTTGGAGACCTTTACACATGTTGGGGGGTCTGCTCTTCCCTTAGAATCATTTTGGGTCCACAACTGTAACAAACTTATATCAATGTCAGAAGTACATGTTGATTCCCTTGCCAACCTTCAACGCTTTCGTCTAAGTTTGGTTCCAAAGTTGGAATCATTGCCTGAAGGTGGTTTGCCTTCTAACTTGCGATCATTTGTTATTAAGGGCTATAATGAACTATCTTCTATACCAATCCAAGACTGGGGGTTTCAACGCCTGACTTCTCTCTCATGGGTTGGAGTTTCGGGTGATGGAAGTGAAAGTATTCTCCATAATTTACTAAAGAATCAATTACTACCCACTTCTCTTGTGAGTATTTACATCAACTCTATGTCCAATCTTAAATTGTTAGAAGGAAAAGGGCTTCAACACCTTACTTCTCTTGAACAGCTCTCCATCTATGGCTGTGAAAACCTTGAATCATTGCCAGAAGATGCGCTACCATCCTCTCTTTTGTTGTTGGAAATCAGACGTTGTCCAAAATTAGAAGAGAGATATGATTATGAGAGAGGGAAACACTTGTCCAAGATTGCTCATATTCCCACCATACGAATCAATGGAGAATACTATGATCCTTGA 3738 0.3895 MELAAKVGEALISASVQTLLDRISSSEFRDFMKSRKLDVSLLDQLETTLLMLGAVLNDAEEKQITNDAVKKWLEKLKDAVYDAEDLLDEINTESLRCKADKDSQNFVNKVHSFLSSSFGQFNREMNSKLEKASRRLEHFAKQKDILDLQSVSLKAHKTASTSLVNESLVVGREDDKEKLLKMLLCDEDPKGNAIGVITILGMGGLGKTTLAQLLYNDKKVQDHFDLNAWACVSDDFNVVEVTKSLVESVTKKVYDSKNLDFLRVELRNSLSNKKFLIVLDDLWNEKYSDWDDLITPFHSGRTGSKIIVTTREPRVVQITHTFPVHELSRLSDDNCWFLLSKHAFGNEDPNKHPELEAIGRQIAKKCGGLPIAAKTIGGLLRSKVDAKEWNKILNSKQWEILNANVLPALHLSYLYLPSHLKKCFAYCSIFPKDLVLEKKKLVLLWMAEGAVQQFHGEETLEAEVEDYLNELLSRSFFQQYGSNPKKFVMHDLINDLAKFVAGKNYVQFEENDVPKSARHLLFSQKEYNSYKECESFCHLNYLRTLLTQNEFRDWNPSCVLSKKLLNGLLTKLKCLRALSLSGYENVVEVPNSIGNVLHLRYLNLSYTSIRSLPDAVFTLYNLQTLLLSNCVNFNELPEKVEKLVNLRHLDISATALKEMPTQVAKLQNLQNLSTFIVGKQPDGLAIKELKRLPHLQGKLSISNLQNVVDSTDALEANLKNREKIAELVLEWDCDASDSQTVKNILNMLQPSTNLKKLTINHYGGTRFPGWMGDSSFINITNLCVSDCSNCVLLPQFGELPSLKELSIGGMGSVHTVGHEFYCSKPEYSSFQPFPSLEILIFENMPIWEEWMLFDGEGVKFPFPRLKSLSLCDCPILRGDMPHNLPSLTNVSISNCKQLKAKSATLQWITSIQELNIERGEQGLLRAFDDLSLDSLKFLTIGKCDSLRSLPRMIMGSRCLQMLFLGDIPSITSFPIDGLPTSLRRLDIGNCEKLEFLPQDSWQNYTSLEDLRIDNSCPSLKSFPLGCFPKLKWLDICSCHNLETFTHVGGSALPLESFWVHNCNKLISMSEVHVDSLANLQRFRLSLVPKLESLPEGGLPSNLRSFVIKGYNELSSIPIQDWGFQRLTSLSWVGVSGDGSESILHNLLKNQLLPTSLVSIYINSMSNLKLLEGKGLQHLTSLEQLSIYGCENLESLPEDALPSSLLLLEIRRCPKLEERYDYERGKHLSKIAHIPTIRINGEYYDP 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1812g00004 1245 Coils Coil 73 93 - -
Pral1812g00004 1245 Gene3D Ribonuclease Inhibitor 1075 1230 IPR032675 -
Pral1812g00004 1245 Gene3D Ribonuclease Inhibitor 538 922 IPR032675 -
Pral1812g00004 1245 PRINTS Disease resistance protein signature 269 283 - -
Pral1812g00004 1245 PRINTS Disease resistance protein signature 196 211 - -
Pral1812g00004 1245 PRINTS Disease resistance protein signature 882 898 - -
Pral1812g00004 1245 PRINTS Disease resistance protein signature 366 380 - -
Pral1812g00004 1245 Pfam NB-ARC domain 172 395 IPR002182 GO:0043531
Pral1812g00004 1245 Gene3D - 150 322 IPR027417 -
Pral1812g00004 1245 SMART LRR_typ_2 1178 1202 IPR003591 -
Pral1812g00004 1245 SMART LRR_typ_2 643 666 IPR003591 -
Pral1812g00004 1245 SMART LRR_typ_2 596 619 IPR003591 -
Pral1812g00004 1245 Gene3D - 16 134 - -
Pral1812g00004 1245 PANTHER DISEASE RESISTANCE PROTEIN RP 44 865 IPR044974 GO:0006952
Pral1812g00004 1245 FunFam Probable disease resistance protein At1g63360 413 499 - -
Pral1812g00004 1245 Gene3D - 329 411 IPR042197 -
Pral1812g00004 1245 SUPERFAMILY L domain-like 926 1217 - -
Pral1812g00004 1245 FunFam Probable disease resistance protein At1g61300 152 321 - -
Pral1812g00004 1245 Gene3D - 412 499 IPR036388 -
Pral1812g00004 1245 Coils Coil 122 142 - -
Pral1812g00004 1245 Gene3D Ribonuclease Inhibitor 923 1057 IPR032675 -
Pral1812g00004 1245 SUPERFAMILY L domain-like 488 916 - -
Pral1812g00004 1245 Pfam Rx N-terminal domain 12 106 IPR041118 -
Pral1812g00004 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 427 IPR027417 -
Pral1812g00004 1245 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1812g00004 Pral-Chr1812 42065 46330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1812g00004 582 672 WRKY Transcription Factor Family AT4G12020 33.696 2.53e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1812g00004 - - pcin:129317775 1310.05