Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1810g00045 ATGGGTGGAGAAGAGGGAGGTAGAAAATCTATAGCAGACCAGGATTCGCTGGAATCGTTCGCCGGAGGTTCCAATATCGCGCGAGCTGTCAAGCTTATATCTTCCTTGATTTCTCTTTCCCATTCAGTCAGGGTCTTCGCGGCAAAATGGCAACTGATTCGGAACAAGCTCGAGGAGCTCCATTCAGGGCTAATCGCCGCAGAGGACTGCGATTCCGGCGAGCACCCATCGCTCTCCGGTCTGGTTCCTGCGATACTGGCCACCGTGAACGAGTGCCATGATCTCGCTCGCCGTTGCGTTGATCTTTCGTACAGCGGGAAGCTTTTGATGCAGAGCGATTTGGATGTGATGTTCGCCAGGTTCGCTTGTCACGCGAAGAAGCTATCAGAGGTATACTCAGCTGGTATTTTGACTCACAAGTATGCCCTCGTTGTTTCGAGGCCTAGTCTTGGAGCTTGCAAAGATGATATGAGGTTTTACACGAGGGACTTGCTGACGAGAATGAAGATTGGCGATGTGGGAATGAAGAGGCAGGCCCTGATTAATCTGCACGAAGCTGTAGAGGAAGACGAAAAGTATGTGAAAGTGATTGTGGAAATAGGAGATGTTGTTCATCTTCTAGTAAATTTTCTTGATTCGCCGGAGATGGAAATCCAGGAAGAATCTGCCAAGGTGCTCTCTGTTATCGCAGGCTTTGATTCCTACAGAGGGGTTCTGATCACATCTGGGATTATTGCTCCTCTGATCCGCGTTTTGGAATGTGGGAGTGAGTCAGGGAAGATCGGGGCTGCCAGGTGTTTGATGAAACTAACGTTCAATTCAGACAATGCTTGGTCGGTTTCAGCTCATGGAGGGGTCACTTGCTTGCTCAAAATCTGCTCTAATGGAGAGCCCAAAGGAGAATTGGTTGGTCCTGCTTGTGGGGTACTGAGAAATCTCGTAGGCGTTGAAGAAATAAAGAGATTCATGGTTGAAGAAGGTGCGGTTTCTACGTTTATCAGGCTTGTGAAATCCAGGGACGAAGCGAGTCAGGTAAATTCCATACAATTTATTCAAAGTATAGCCTCTGGAGATGAACAGGTTAGGCAAATGGTGATTAGAGAAGGTGGAATTCGGGCTTTATTACGTATTCTGGATCCTAAATGTTCATGTTCTTCCAAAACCCGGGAGATAGCAATGAGAGCTATTGAAAACTTGTGTTTTTCGTCATCTAGTTCTGTAAGTATATTAATGAGTTATGGCTTTGTGGATCAACTGCTATATTATATTCGTAATGGGGAGGTTTCCATCCAAGAATTGGCTCTGAAAGTAGCGTTCAGCTTCTGTGGAACATCAGAGGAGGCTAGGAAAGCCATGGGCGATGCAGGTTTCATGCCAGAGCTTGTTAAGTTTCTGAATGCAAAATCATTCGAAGTTCGTGAAATGGCAGCTGAGGCCCTCTCTGCCATGGTTATGGTGCCCAAGAACAGAAAGAAATTTGTGCGGGATGACCAAAACATCGCTCTTCTTCTCCAACTGCTTGATCCAAAAGAGGGAAATTCAAGTCACAAGAAGTTCCTAATCTCTATCTTAATGTCATTAACAAGTTGTAACAGTGGGAGAAAAAAGATTGTGAGCTCTGGGTATGCCAAAAACATAGAGAAACTTGCAGAAGCTGAAGTTTCATCAGATGCCAAGAGGCTTGTGAGGAAGCTATCCACGAACAGATTCCGCAGTATGTTGAGTGGAATCTGGCACTCATGA 1743 0.4596 MGGEEGGRKSIADQDSLESFAGGSNIARAVKLISSLISLSHSVRVFAAKWQLIRNKLEELHSGLIAAEDCDSGEHPSLSGLVPAILATVNECHDLARRCVDLSYSGKLLMQSDLDVMFARFACHAKKLSEVYSAGILTHKYALVVSRPSLGACKDDMRFYTRDLLTRMKIGDVGMKRQALINLHEAVEEDEKYVKVIVEIGDVVHLLVNFLDSPEMEIQEESAKVLSVIAGFDSYRGVLITSGIIAPLIRVLECGSESGKIGAARCLMKLTFNSDNAWSVSAHGGVTCLLKICSNGEPKGELVGPACGVLRNLVGVEEIKRFMVEEGAVSTFIRLVKSRDEASQVNSIQFIQSIASGDEQVRQMVIREGGIRALLRILDPKCSCSSKTREIAMRAIENLCFSSSSSVSILMSYGFVDQLLYYIRNGEVSIQELALKVAFSFCGTSEEARKAMGDAGFMPELVKFLNAKSFEVREMAAEALSAMVMVPKNRKKFVRDDQNIALLLQLLDPKEGNSSHKKFLISILMSLTSCNSGRKKIVSSGYAKNIEKLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1810g00045 580 Gene3D - 161 569 IPR011989 -
Pral1810g00045 580 SUPERFAMILY ARM repeat 148 551 IPR016024 -
Pral1810g00045 580 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 579 - -
Pral1810g00045 580 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 328 IPR000225 GO:0005515
Pral1810g00045 580 SMART arm_5 316 356 IPR000225 GO:0005515
Pral1810g00045 580 SMART arm_5 358 401 IPR000225 GO:0005515
Pral1810g00045 580 SMART arm_5 232 272 IPR000225 GO:0005515
Pral1810g00045 580 SMART arm_5 445 485 IPR000225 GO:0005515
Pral1810g00045 580 SMART arm_5 273 315 IPR000225 GO:0005515
Pral1810g00045 580 SMART arm_5 190 231 IPR000225 GO:0005515
Pral1810g00045 580 Pfam Armadillo/beta-catenin-like repeat 446 481 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1810g00045 144 434 U-box Gene Family AT2G23140 26.780 3.04e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1810g00045 - - qsa:O6P43_012559 863.988