Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1810g00039 | ATGGAAATGGAACATTCATGTGAAGTATACCCCGCAGACGCCAGCACCATAATTTCTTCCGACAATTTCATCTCATCTTCTTCAAGCGAACAGTACTTTAAGATCGAGGTCGAATGCAAACGCTATCTTGTTTGGGATGGTATCGGTGTAGACCGTTTTACTAATTCCACTGAGTGTGGTTTCTCAAATATCAGAAAGCAAGACATAGAACGGTCGGTACATATGCTTTTGTCTTACTTTAATGTTCCTGAGAATGATCGACCTCGTAGTGCAGCAAAAATCTTGGCTTGTGCCCAACACATGGCGAATGTGACGCACAAGAACCACAGGATTATGGGTATGCGTGTTGTTATAACAAATACTACTCTAATTTATCAGTATGAATATCGTCTTCGTAGGATTTTGGAAGAATCAATGAATGATGAAGATGAAGTTCTGAGAGCCGACCCTGCGTGCAAGTCAGCCATTGAGGGGTTGGAAAGGGTGAAGGTAGAGCAAATAGAAGGGACCAGTGTGGGAAAATATGGTAACTGCACAATTTGCTTTGAAGATTTTGCAATTGATTCAGAAGTTCTTCGATTGCCATGCTCCCACTTATTTCATGGCAAATGCATCATTAATTGGTTACAAAATCGCAACACTTGCCCTCTGTGTCGTTTTCAAATGCCTACAGCTTATGATCAATGA | 687 | 0.4119 | MEMEHSCEVYPADASTIISSDNFISSSSSEQYFKIEVECKRYLVWDGIGVDRFTNSTECGFSNIRKQDIERSVHMLLSYFNVPENDRPRSAAKILACAQHMANVTHKNHRIMGMRVVITNTTLIYQYEYRLRRILEESMNDEDEVLRADPACKSAIEGLERVKVEQIEGTSVGKYGNCTICFEDFAIDSEVLRLPCSHLFHGKCIINWLQNRNTCPLCRFQMPTAYDQ | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1810g00039 | 228 | SMART | ring_2 | 178 | 218 | IPR001841 | - | |
Pral1810g00039 | 228 | FunFam | E3 ubiquitin-protein ligase RNF181 | 139 | 225 | - | - | |
Pral1810g00039 | 228 | SMART | ringv_2 | 177 | 219 | IPR011016 | GO:0008270 | |
Pral1810g00039 | 228 | Pfam | Ring finger domain | 177 | 219 | IPR001841 | - | |
Pral1810g00039 | 228 | SUPERFAMILY | RING/U-box | 177 | 224 | - | - | |
Pral1810g00039 | 228 | CDD | RING-H2_PA-TM-RING | 178 | 219 | - | - | |
Pral1810g00039 | 228 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 75 | 223 | - | - | |
Pral1810g00039 | 228 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 137 | 225 | IPR013083 | - | |
Pral1810g00039 | 228 | ProSiteProfiles | Zinc finger RING-type profile. | 178 | 219 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1810g00039 | Pral-Chr1810 | 271744 | 272430 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1810g00039 | 129 | 224 | C3H Transcription Factor Family | AT3G02340 | 41.414 | 6.31e-19 | 82.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1810g00039 | - | - | pcin:129295769 | 296.204 |