LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1810g00030	ATGCAAACTAGATATTTGGAGAGATCGGGTAGTATGGCCAGGGAAAAGCGAAGTCTGGATTCGACTTCGTCTGAGGAAGATCAGCCCGATAGGAAGCGGCCGGCTTTAGCTAGTGTAATCGTTGAAGCCCTCAAAGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAACCAATTCTACGGAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAATTAGGCCCTGCCAAGCTTACTGGGAGGACATCTCCTAAACGTATAGAAGGCCCTGATGGTAGAAATTTACAGTTGCACTTTAAGACCAGGCTATCCCTTCCCCTCTTTACTGGAGGGAAAGTGGAGGGGGAACAAGGTGCTGCCATTCATATTGTTTTGATTGATGGAAACACTGGCCATGTTGTCACATCTGGCCCAGAGTCCTCTGCGAGATTAGATGTTATTGTGCTCGAAGGGGATTTCAACAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAAAGCCATGTTGTCAAGGAGAGGGAAGGAAAAAGGCCTCTCTTAACTGGTGATTTGCAAGTCACTCTGAAAGAGGGTGTAGGAACACTAGGTGAGCTCACATTTACTGACAATTCTAGCTGGATAAGGAGTAGGAAATTCAGGCTGGGGCTTAGAGTTGCCTCAGGTTGCTGAGGGATGCGTATTCGTGAAGCCAAAACAGAAGCCTTCACTGTTAAAGATCACCGTGGAGAATTATACAAGAAACACTATCCACCTGCCTTGAATGATGACGTCTGGAGGCTAGAAAAGATTGGAAAAGATGGGTCTTTTCACAAGAGGCTAAACAAAGCAGGAATATTCTCTGTTGAAGACTTCCTACGACTTGTGGTCAGAGATCCTCAGAGGTTGCGAAATATTCTTGGGAGTGGCATGTCTAATAAAATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTTAGTGGAAAGCTTTATGTATACTACCCTGAAGATGCAAGGAATGTTGGAGTTGTTTTCAACAACATATACGAGTTGAGTGGCTTAATTACTAATGGACAATATCATTCAGCCGATTATCTCTCTGAAAGTCAAAAGGTTTATGTGGACACATTGGTGAAGAAGGCATATGACAATTGGATGCATGTTGTAGAGTATGATGGGCAGTCTCTGATAAATTACAATCAGAATAGGACTTTGGGTAATTCTCAACCTCAGCTGCCGATGGGCTCCCATGATTATTCAAACTCGCTTGATCAGCAGATCTCCATCCCAAGCTTGCCTGTTCCAGTACCTGCGGGGCAGCCTGCAATGGATTCAGGAGTAGCAATTGGAGGTTACCATGACGCTCCAGCTGCCAGATTTTCGTTGCCACCACATCATGCTAATCTCAATTCTTCGATTCAGTTTGATGGCACTGACATGCAACTACAAAACCAGTTGATGGGCTCTTCAAACCAACCTCAACTTCCAAGGAATGAAGATGGACTGACTCGTGGTCCATCACAGTCAGCTACACCAGGATTCCAGAGTGTCAGCATGTCAAATCCTTCTTATAGAGGCCTTGAAGACTTATTCCCGGAGGAGGAGATTCGAATTAGAAGCCATGAAATGCTAGAAAATGAAGATATGCAGCATCTACTGCGTATTTTTAACATGGGAGGCCAACCTCATACTTCCTTTAATGCTCCTGAATATGGGTATCCTTGTTCATCTGCTTATGTGCCAACTTCCCCCATGAACTTTAACTATGAGGATGATCGAAACCGCTCCTCAGGAAAAGCTGTTGTGGGCTGGCTCAAGCTCAAGGCAGCTTTGAGATGGGGCATTTTTATTCGCAAGAAGGCTGCTGAAAGAAGGGCCCAACTTGTTGAGTTGGATGATTCATAG	1896	0.4457	MQTRYLERSGSMAREKRSLDSTSSEEDQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRTSPKRIEGPDGRNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIDGNTGHVVTSGPESSARLDVIVLEGDFNNEDDDNWSEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLRVASGCCXGMRIREAKTEAFTVKDHRGELYKKHYPPALNDDVWRLEKIGKDGSFHKRLNKAGIFSVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNNIYELSGLITNGQYHSADYLSESQKVYVDTLVKKAYDNWMHVVEYDGQSLINYNQNRTLGNSQPQLPMGSHDYSNSLDQQISIPSLPVPVPAGQPAMDSGVAIGGYHDAPAARFSLPPHHANLNSSIQFDGTDMQLQNQLMGSSNQPQLPRNEDGLTRGPSQSATPGFQSVSMSNPSYRGLEDLFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQPHTSFNAPEYGYPCSSAYVPTSPMNFNYEDDRNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS	632

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1810g00030	632	Pfam	Calmodulin binding protein central domain	256	322	IPR046830	-
	Pral1810g00030	632	Pfam	Calmodulin binding protein-like N-terminal domain	97	244	IPR046831	-
	Pral1810g00030	632	PANTHER	OS02G0177800 PROTEIN	13	547	IPR012416	GO:0005516
	Pral1810g00030	632	MobiDBLite	consensus disorder prediction	1	34	-	-
	Pral1810g00030	632	MobiDBLite	consensus disorder prediction	483	519	-	-
	Pral1810g00030	632	MobiDBLite	consensus disorder prediction	9	33	-	-
	Pral1810g00030	632	Pfam	Calmodulin binding protein C-terminal domain	327	389	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1810g00030	Pral-Chr1810	200196	206233	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1810g00030	11	627	Calmodulin-binding Proteins	AT5G57580	64.577	0.0	792

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1810g00030	-		-	gmx:100812605	1044.26