Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1810g00017 ATGGATGTTGTTGGATCTTTAGCAAGCATCCTGAGCTGCTTGTTCTCTCAGAACTCACTGCAACAATCGCTTGAACGACAGTGTAGGCATCTTAGAAAACCAAGAAAGAATTTGAACAAGCTAAAAGATTTAGTGGAACAGCTAGATGCTCGGAAATCAGATGTGAACACTAAACTAGATCAAATGTGGCTGGGAAAAGGGATGAATCCACGGGAAGAGGTGAAGCTATGGATAAAAAGTGTTGATCGAGTTAAAATTCAAGTGAGCAGCCTCACGGAGAATAACAATGGATGTTCCTTCAACTTTGTTTGTTCACGAATAAAATTCGGAGAAGTAGTAGAAGAGAAGATCAGTGAGGTTAAAGAGCTTCTTGACAAGGGTCAGTTTTTGGATGATTCGGTGGCTGAAAACTTGCCTAAGGTAGGGTACACTCTTCCTGCATCTCCATTAATGGAGTGTGCCACAACGTTGAAGAGTTTAACGAGGATCTTGGAATGCTTATCACGAGAGAGTGTGAAAAGGATTGGAGTTTATGGGATGGGAGGAGTGGGCAAAACAACTATCATGACAGAAATCAACAATCGTCTTTTAGAAGGGAGAGATTTTGATCTTGTCATGTGGGTTTCTGCACCAAAAGGGCCAAGTCTTGCAAAACTACAGAAGGGTATTGGAGAGAAGCTGGATTTAGATCTTTCGATGATTGATGATGATGTTACTAGAGCAGCCAAGCTATTTGAGGCTTTAAACAGGAGGAGGAAATATGCACTGATTCTGGATGATTTATGGGAGCCTTTCTCTCTTGAAACGGTTGGAATACCGATACCAACAGTCGAAAATGGTTGCAAGTTGGTGATCACAACGCGATTGTTGAGCGTTTGTCGAGGTATGGAAACAGATGAGGACGTGGAAGTGAAGGCCCTTCAAGATGATGAGGCATGGGATCTCTTAAGGTATAAAGTTGGACCAGTAGTGTCAAATTCCGCAGAAGTAGAGGTGATTGCAAAGGAGGTGACAAGAGAGTGCGGAGGTTTGCCTCTTGCTATTGTCACAGTAGGACGAGCCTTAAGAAATGCTGCTGATGTATCAGAGTGGGAGTGTGCATTAGATGAGTTAAGAGCCTCGACAGCGAATATTGAAAGGATGGAAGAAGCAGTCTTTGCACATTTGAGATTTAGCTATGCCAAGCTAAAGGATGACACAAGCAGGTCTTGTTTCCTCTTTTGTGCTTTATACCCTGAAAGTCATCAAATTGATACTAATGAGCTGATGGAATATTGGATGTGGGAAGGTTTATTGGGTTATGTTGGAAGAATGGCTGCAATCAAGAGGAGGGGGAAAATGATATTGAATGAATTAAAACATGCGTGCTTGTTAGAAGGTCTAACTCAAAATGCGGTGGAATTCGTTAGAATGCACGATTTGATCAGAGATATGGCTATTACAATCATGAGAACGAGCCCTCACTGCATAAGTAAAGCGGGGACTAGAATGACAAAACATCAATGGATGGAGGAATGGGCAGAAGATGTTCAAAGGGTCTCACTTATGAGAAATGACTTGAAATATATTCCCTTCAATTACAACCTCATGTGCCCTAGACTTACTTCCCTGTTGTTGCAATTCAACTCATTTTCTGAAAATATATCCCATGAATTCTTCGAAAATATGCAGTTTCTGAAAGTTCTGGATCTCTCCTATACTGGGATTGATTTCTTGCCTAACTCGGTCTCTAATTTAGAGAATCTATCTGCTTTGTTATTGAGTAACTGTTGGAATTTATCAACAGTTCCTTCTTTAGCAAAATTGAATAAGCTGATGGTCCTTGACCTCTCCTGCTCTCCAAGGATGAAAGAACTTCCAAATGGGATGCAAAATTTGGGAAACTTGAGACGCTTAAACCTTTCCAAGACTGGAATTGAAATCTTCCCATTTGGATTAATATCCAAATACACCCTTTTGGAAGACTTGCTGATAGGTGGTTGTGGTAGCTTGTGGGGATCAATGACAGTCAAAGCAATTAGCGGTGGAGCTTCCATAGAAGAAGTCATTTCCTCAAATCTGTCTTCTCTTGAACTAGACTTGTGGAATACAGATGTGTTTGATCAATATGCCAAATCTGATCATTGGGTTCAGCTGGATAAGTTCAGGATAACAATTGGGCAGCCCCAAGTACAGTTTTGTGAAGAGAGAAGCTTAGCTTTTAGTGGAAGATTTGTTCTAAGAGGAAATCCAGTTTCTCTACCACCAAATACCTTAGAGCTGCATTTGGATGACTGTGCTGATATTAAGAATCTAAGCATGTGCCTAGTGAATGTGACACAATTGAAATCCTGTAAAATCAGGTGGTGCGATGACATCGTATGCATAATTGAGTCAGAGGAAGAGGAAAATACTTTATCCATGTTAGAAAGGATGGAACTTTTAGTTCTAGGAAACTTGAAGATGATATGTAGGGACGTAGTGAGACCTGGCACTCTTATGAGCTTGAAGAGCATTACTGTGGAATACTGTCCAAAACTGAAGACTCTATTCTCAGGGCAGATTTTACTTCAACTTAAGAATCTAGAAGAAATTAGTGTCCGCAGTTGTACTGGTATGGAGTATGTGATGCAAGAAGAAGAGGGAGATTTCATGGGAGGTAATAATTTTGGAATTGAGTTTCCGAAGTTGAAGAGGATGAAACTGAAATTCATGCCCCTTTTGATGAGTATATATGATGGAACCATTATCTGCCCTTCTTTGAGAAGTCTTGAAATAGCATCCTGTGAAGCCTTAAAAAGGCTTCCTCTTGATCCGTTAACAACGCCTGCTCTTGAAGAAATCAAAGCAACCAGAACATGGTGGAACTCATTAGAGTGGGATCAACCTGATTTTAAAAATGCCCTGCAACCTTTCCTTATTGAAATTAGATTGACAAGTACGAGTGATAGATAA 2934 0.4052 MDVVGSLASILSCLFSQNSLQQSLERQCRHLRKPRKNLNKLKDLVEQLDARKSDVNTKLDQMWLGKGMNPREEVKLWIKSVDRVKIQVSSLTENNNGCSFNFVCSRIKFGEVVEEKISEVKELLDKGQFLDDSVAENLPKVGYTLPASPLMECATTLKSLTRILECLSRESVKRIGVYGMGGVGKTTIMTEINNRLLEGRDFDLVMWVSAPKGPSLAKLQKGIGEKLDLDLSMIDDDVTRAAKLFEALNRRRKYALILDDLWEPFSLETVGIPIPTVENGCKLVITTRLLSVCRGMETDEDVEVKALQDDEAWDLLRYKVGPVVSNSAEVEVIAKEVTRECGGLPLAIVTVGRALRNAADVSEWECALDELRASTANIERMEEAVFAHLRFSYAKLKDDTSRSCFLFCALYPESHQIDTNELMEYWMWEGLLGYVGRMAAIKRRGKMILNELKHACLLEGLTQNAVEFVRMHDLIRDMAITIMRTSPHCISKAGTRMTKHQWMEEWAEDVQRVSLMRNDLKYIPFNYNLMCPRLTSLLLQFNSFSENISHEFFENMQFLKVLDLSYTGIDFLPNSVSNLENLSALLLSNCWNLSTVPSLAKLNKLMVLDLSCSPRMKELPNGMQNLGNLRRLNLSKTGIEIFPFGLISKYTLLEDLLIGGCGSLWGSMTVKAISGGASIEEVISSNLSSLELDLWNTDVFDQYAKSDHWVQLDKFRITIGQPQVQFCEERSLAFSGRFVLRGNPVSLPPNTLELHLDDCADIKNLSMCLVNVTQLKSCKIRWCDDIVCIIESEEEENTLSMLERMELLVLGNLKMICRDVVRPGTLMSLKSITVEYCPKLKTLFSGQILLQLKNLEEISVRSCTGMEYVMQEEEGDFMGGNNFGIEFPKLKRMKLKFMPLLMSIYDGTIICPSLRSLEIASCEALKRLPLDPLTTPALEEIKATRTWWNSLEWDQPDFKNALQPFLIEIRLTSTSDR 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1810g00017 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 408 IPR027417 -
Pral1810g00017 977 Pfam NB-ARC domain 159 394 IPR002182 GO:0043531
Pral1810g00017 977 Gene3D - 144 306 IPR027417 -
Pral1810g00017 977 FunFam Probable disease resistance protein At1g63360 393 481 - -
Pral1810g00017 977 Gene3D Ribonuclease Inhibitor 481 718 IPR032675 -
Pral1810g00017 977 SUPERFAMILY L domain-like 470 931 - -
Pral1810g00017 977 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 937 - -
Pral1810g00017 977 FunFam Probable disease resistance protein At5g66910 306 392 - -
Pral1810g00017 977 FunFam Probable disease resistance protein At1g61300 149 301 - -
Pral1810g00017 977 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Pral1810g00017 977 Gene3D - 307 392 IPR042197 -
Pral1810g00017 977 Gene3D - 393 480 IPR036388 -
Pral1810g00017 977 PRINTS Disease resistance protein signature 600 616 - -
Pral1810g00017 977 PRINTS Disease resistance protein signature 341 355 - -
Pral1810g00017 977 PRINTS Disease resistance protein signature 248 262 - -
Pral1810g00017 977 PRINTS Disease resistance protein signature 174 189 - -
Pral1810g00017 977 Coils Coil 38 58 - -
Pral1810g00017 977 Gene3D Ribonuclease Inhibitor 845 952 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1810g00017 Pral-Chr1810 117948 120881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1810g00017 172 634 WRKY Transcription Factor Family AT5G45050 22.269 2.92e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1810g00017 K13459 - qsa:O6P43_012576 1141.72