Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1806g00002 ATGGAGGGCAGTGAGAATAATGGGTCGAGTACTGGGAGCAATGGAGGAGGGGGTTCGCGATGGAACCCTACGAAAGAGCAGATAAGCATGTTGGAGAATCTGTATAAGCAAGGCATAAGGACCCCCAGTGCTGAGCAGATACAGCAAATAACTGCTAGGCTTAGGGCGTTTGGTCACATCGAAGGCAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCCAGGCAGCGACAGAAGCAGAAGCAAGAAACCTTTGCTTACTTCAATCGCTTTCTTCATTCCTCCCCTCACCATCCGCCTCTCCTCCCTTCCTCACTCTGCCCTAATGTGTTGTGCACGCCATATTATCTGCCACACAGTGAAATGGGGTTTGTTGCTCAACATCCCAAAGTGCTTCTGCCAGGGTCAGGTATCAGGAGGATGCCCAGAAACTGTGAGGTGTACCAACAAATGCAGGACACAGTGATGTTGGATGATGGGCACTTGAGGAACAAAGAAACGCTTGCGCTTTTCCCGCTGCAGCCAACTGGCTTTCTGGAAAACAAAGCTTCATTTTCAGTTGATGCTAATCCAGCTTCTGTTTTCCCGGGTCATCATCACAATGATGAAGAAGAAGGCCCACCAGGAAACCAGCCCTTCTTTGAATTTCTTTCTTCTTCAGGCCAAGAGGAGTTTGTGCATAGAAAGTGA 690 0.4841 MEGSENNGSSTGSNGGGGSRWNPTKEQISMLENLYKQGIRTPSAEQIQQITARLRAFGHIEGKNVFYWFQNHKARQRQKQKQETFAYFNRFLHSSPHHPPLLPSSLCPNVLCTPYYLPHSEMGFVAQHPKVLLPGSGIRRMPRNCEVYQQMQDTVMLDDGHLRNKETLALFPLQPTGFLENKASFSVDANPASVFPGHHHNDEEEGPPGNQPFFEFLSSSGQEEFVHRK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1806g00002 229 SUPERFAMILY Homeodomain-like 14 86 IPR009057 -
Pral1806g00002 229 ProSiteProfiles 'Homeobox' domain profile. 14 79 IPR001356 GO:0003677
Pral1806g00002 229 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 186 IPR044555 GO:0003700|GO:0099402
Pral1806g00002 229 FunFam WUSCHEL-related homeobox 4 18 85 - -
Pral1806g00002 229 Gene3D - 18 87 - -
Pral1806g00002 229 Pfam Homeodomain 19 78 IPR001356 GO:0003677
Pral1806g00002 229 SMART HOX_1 16 83 IPR001356 GO:0003677
Pral1806g00002 229 MobiDBLite consensus disorder prediction 1 23 - -
Pral1806g00002 229 MobiDBLite consensus disorder prediction 193 212 - -
Pral1806g00002 229 CDD homeodomain 20 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1806g00002 Pral-Chr1806 8320 9525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1806g00002 1 218 Wox Gene Family AT5G59340 41.762 3.54e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral1806g00002 Homeodomain 4.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1806g00002 - - gmx:100817714 236.498