Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1804g00006 ATGGATCTTCACTTTGACGGAAGTCAAGATTTTATAAACGGTTATAAACTTGATGATGGCGCCGCCAGCTCCGATTCAAACGATTTACCATATCCAGCGAGCGAGTGGGAACTCGACGAAAACTATCGGATACTTCTCAACTTCACAACCGATCCACTGTATCAACCTTATGCGTCTCCAGTAAGTTATGCTCCGCAATCTAGCGTGAAATATGAAGGATCAGAGCGGTTAGTTTCATCCTCGACTACAGGACCAGTAGAAGGCATGTCAGATGTGGCAGCTGCGTCGACGACTTCGTCCCCAGATCCTTCTCTGGAAGACGCTGACTTTTCAGAAACTATGAGGTACATAAGCCAAATGCTTATGGAAGAGAACTTTGAACAGAAGCCAAGCATGTTTTATGATCCCTTGAGTCTACAAGTCACGGAGAAATCATTCTATGATGCTCTCAGAAAGGATCATCCTCCTTCCCCCAATCAGCATCCCCTAGACATTCATCAGAATCTTGATAGCACAGATGATAACTGTTGTGCTAGTAGTAATGATTTTGTCAATAACAGTAGCAGCAGCAACAAGTCTCAGGAGGCTAATAAGCCCTCTTCCTCCTATGCTTCATTTTCTGGAGATTATGCGTCCCACTTAAATTTTCAACCCATCTCTGAGAAACCATCTCAACCTCCGAGTGCTTATACTTGTATCAGCGACGGGCTGTCAGAGGTGGATTCCTCTTTTACTAAGGTCATGGCTCAAAATATCTTTACTGATGCAGAATCCGTTTCACAATTTAAAAGGGGGTTGGAAGAAGCTAGCAAGTTTCTTCCCAGAGGACTTCAACTTGTCACAGGTCTGGAGAGCAGCAACGTGCTTCCAGAGTCCATGGGAGCGGCTAAAAAGGCAATAAGAGATATTCGGGAGAATTCACATGGAATGAAGGGTAGGAAGAATCATGAACGTGAAGCTAGTGATACAGAAGAAGGGAGAAGTAACAAGCAGTCGGCAGTGTATGCCGACGAGAGTGATATATCAGATATGTTTGATAAGGTGTTGCTTAGTGTTGAGAATGTTCCGATATGTGAGGAGCACCACAGATGGTTGCAGAATGGAACAGACAAGGCGAAAGAGCCAATTGAGCAGCTAAATTCATCCAACGGGGCGAAGACCCGCGGTAGGAGACAAGGCAGGAAGAAGGAAACCGTGGATTTAAGGACTCTTATGGCTCTATGCGCGCAAGCTGTGTCTGCAAATGACTGCAGAACTGCCAATGAACTACTAAAGCAGATTAGGCAGCATTCTTCCCCACTAGGTGATGCATCACAGAGGCTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTCTGGCGGTGGTACTGGAACCAAAATATTCTATGCCTCTCTAAGCTCTAAGAGGATATCTTCTGCTAATATCTTGAGAGCTTACTCGGTTCTAATATCTGTCTGCCCCTTCAGGAAGTTTGCATATTTTTTCGCAAATAAGATGATTATGAAAGCAGCTGAAAAGGCAGAAAGTCTTCATATTGTCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTTCTTTCGCAAAGGGCTGGTGGGCCTCCGAAACTACGCATCACAGGGATAGAATTGCCCCAGGCTGGGTTTCGTCCAGCAGAATTAATTGAGGAGACCGGTCGACGTCTATCCAATTATTGCAAGCGTTTTAATGTTCCGTTTGAATACACAGCCATAGCATCACAAAACTGGGAGACCATCCCGTTAAAGGACTTTAAGATTGAGAGCAACGAACTGCTTGCTGTGAACTGTTTGATGAGATTTAAAAATTTACTGGACGAGACGATTGAAGTAAAAAGTCCTAGAGATGCAGTTTTGAATTTGATCAGAAAGATGAATCCTGATATTTTTGTTCAATCCATTGTCAATGGATCCTACAATGCCCCTTTCTTTGCCACACGGTTCAAAGAGGCACTGTTCCATTTTTCTGCAATGTATGATATGTTTGACACCGTCATACCTCGTGACAATGAATGGAGGCTGATGCTTGAGAGTGAGTTTTTGGGTCGGGAGGTTATGAATGTGGTTGCTTGTGAAGGGATCGAGAGGGTTGAGAGGCCTGAGACATACAAGCACTGGCAAGTTAGGGGTACAAGGGCTGGTTTCAGGCAGTTCCCACTGCCAGATGAGATTATGGTCAAATTCAGCGAAAAGTTGAAGGCATGGTATCACAGGGATTTTGTAATTGATGAACACAACAACTGGATGATTCAGGGCTGGAAGGGCCGCATCATTTATGCTTCCACATGTTGGGGGCCATCATAA 2337 0.445 MDLHFDGSQDFINGYKLDDGAASSDSNDLPYPASEWELDENYRILLNFTTDPLYQPYASPVSYAPQSSVKYEGSERLVSSSTTGPVEGMSDVAAASTTSSPDPSLEDADFSETMRYISQMLMEENFEQKPSMFYDPLSLQVTEKSFYDALRKDHPPSPNQHPLDIHQNLDSTDDNCCASSNDFVNNSSSSNKSQEANKPSSSYASFSGDYASHLNFQPISEKPSQPPSAYTCISDGLSEVDSSFTKVMAQNIFTDAESVSQFKRGLEEASKFLPRGLQLVTGLESSNVLPESMGAAKKAIRDIRENSHGMKGRKNHEREASDTEEGRSNKQSAVYADESDISDMFDKVLLSVENVPICEEHHRWLQNGTDKAKEPIEQLNSSNGAKTRGRRQGRKKETVDLRTLMALCAQAVSANDCRTANELLKQIRQHSSPLGDASQRLAHYFANGLEARLSGGGTGTKIFYASLSSKRISSANILRAYSVLISVCPFRKFAYFFANKMIMKAAEKAESLHIVDFGIQYGFQWPILIKFLSQRAGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFNVPFEYTAIASQNWETIPLKDFKIESNELLAVNCLMRFKNLLDETIEVKSPRDAVLNLIRKMNPDIFVQSIVNGSYNAPFFATRFKEALFHFSAMYDMFDTVIPRDNEWRLMLESEFLGREVMNVVACEGIERVERPETYKHWQVRGTRAGFRQFPLPDEIMVKFSEKLKAWYHRDFVIDEHNNWMIQGWKGRIIYASTCWGPS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1804g00006 778 MobiDBLite consensus disorder prediction 184 204 - -
Pral1804g00006 778 MobiDBLite consensus disorder prediction 373 387 - -
Pral1804g00006 778 ProSiteProfiles GRAS family profile. 392 776 IPR005202 -
Pral1804g00006 778 Pfam GRAS domain family 402 775 IPR005202 -
Pral1804g00006 778 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 320 769 IPR005202 -
Pral1804g00006 778 MobiDBLite consensus disorder prediction 64 108 - -
Pral1804g00006 778 MobiDBLite consensus disorder prediction 303 335 - -
Pral1804g00006 778 MobiDBLite consensus disorder prediction 64 106 - -
Pral1804g00006 778 MobiDBLite consensus disorder prediction 150 172 - -
Pral1804g00006 778 MobiDBLite consensus disorder prediction 366 396 - -
Pral1804g00006 778 MobiDBLite consensus disorder prediction 303 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1804g00006 Pral-Chr1804 37183 40384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1804g00006 113 778 GRAS Transcription Factor Family AT1G07530 49.358 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1804g00006 GRAS 5.6e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1804g00006 - - pcin:129314564 1342.41