Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1802g00011 ATGGAGCTATACCCGATATTGCAAGGTTCCATTATAAATGAACTTTGCCAACTCAAAAATCTAAGTACATTGAATCTTGCCAACAACATGTTTTCCGGAGCAATTCCGGAATGTCTTGGGAATACTTCTTTGCAACAGTTGAATTTTAGCTCTAATATATTGATTTCTCATATACCCTCTTCTCTTTGGAGTCTCAAAGATATTTTGGTTTTAGACATATCTTCCAATGCATTGAGTGGAATAATTTCACCAGAGGTATCAAACTTGAGAACAATCACACTATTGAATTTGTCAAGGAACCAAATTTCAGGAAGCATCCCTACAACTATGGGTGGGTTGATAACTTTGCAAAGCCTATCCTTGGCTCACAACAAATTACAAGGGCCTATACCTGGATCACTAAGAGGCATGATAAGTATTGAGTCAATAGATCTTTCTCACAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCACTACTCCATCTTAAATCTATTAATCTTTCCTACAATTTATTGGATGGAGAAATTCCAAATGGTGGTCCTTTTCAAAATTTCACTGCTCAATCTTTTATGATGAACAAAGGTCTTTGTGGAAAATCCCAACTACAAGTCCAACCATGTAGGAGAGGAAACAAGCACATATCAAACAAAGTGATGCTGGTGATAAAATGCTTAGTGCCTATCATGGTTGTCATTTTGGTTGTTATTGGCATTGTCTTTCTAAAACATAATAGAGACAACGATAACTATGCAACAAAAAGGGATTTAACAAATTTGGATGCACCAACTAGGATATCCTATTATGAGCTTCTACATGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCTCTGGAAGTTTTGGATTAGTATACAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTTTTTAACATAGACATGGAAGAAGCATTGAGAAGTTTTGATATTGAATGTCTTGCCTTGTGCAATTTACGCCACCGGAATCTCGTTAAGATTATTAGTTGTTGCTCAAATGATGCTTTCAAGTCTCTAGTCATGGAATTCATGTCATATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCCTTCAAAGGTTGAATATAATGGTTGATGTTGCAGCTGCATTAGAGTATCTTCATCATGGTACTTCTACTCCGATTGTTCATTGTGACATAAAACCAAGCAATATTTTGTTGGATGAAGATATGGTGGCTCATGTTAGTGATTTTGGCATAGCTAAACTATTATGTGAAGGACAACTTGAAATATATACAAAAACATTGGCTACAGTTGGCTATATGGCACCGGAGTATGGATGCAAAGGAGTGGTTTCTTTCAAAGGAGATGTGTATAGCTATGGTATCATGCTAATGGAGATGTTTACAAGGAAGAAGCCAACCGATGAAATGTTTGTTGAAGGTCTTGATTTGAAAGATTGGGTTAGCAAATCAACACCACATTCAATTATCAATATTCTAGATGCCAATTTGCTACATAAAGGGAATCCAAATATCAGCAATATATTGCCACATATATCATCAATTTTTGAGCTGGCATTAAGTTGTTGCACTAAATTACCTGAAGCACGAATTATGATGACTGATGTTGTGGTCTCATTGAAAAAGATAAGGTCATATTTACGTAAAATGTTAGGAATGCACCACTAG 1701 0.3563 MELYPILQGSIINELCQLKNLSTLNLANNMFSGAIPECLGNTSLQQLNFSSNILISHIPSSLWSLKDILVLDISSNALSGIISPEVSNLRTITLLNLSRNQISGSIPTTMGGLITLQSLSLAHNKLQGPIPGSLRGMISIESIDLSHNYLSGVIPKSLESLLHLKSINLSYNLLDGEIPNGGPFQNFTAQSFMMNKGLCGKSQLQVQPCRRGNKHISNKVMLVIKCLVPIMVVILVVIGIVFLKHNRDNDNYATKRDLTNLDAPTRISYYELLHGTNGFDESNLLGSGSFGLVYKAILPNEKIVAVKVFNIDMEEALRSFDIECLALCNLRHRNLVKIISCCSNDAFKSLVMEFMSYGSLDRWLYSHNYCLDILQRLNIMVDVAAALEYLHHGTSTPIVHCDIKPSNILLDEDMVAHVSDFGIAKLLCEGQLEIYTKTLATVGYMAPEYGCKGVVSFKGDVYSYGIMLMEMFTRKKPTDEMFVEGLDLKDWVSKSTPHSIINILDANLLHKGNPNISNILPHISSIFELALSCCTKLPEARIMMTDVVVSLKKIRSYLRKMLGMHH 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1802g00011 566 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Pral1802g00011 566 Pfam Protein kinase domain 280 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1802g00011 566 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 12 106 - -
Pral1802g00011 566 Gene3D Phosphorylase Kinase; domain 1 241 354 - -
Pral1802g00011 566 ProSiteProfiles Protein kinase domain profile. 279 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1802g00011 566 FunFam Leucine-rich repeat receptor-like protein kinase 115 210 - -
Pral1802g00011 566 SUPERFAMILY Protein kinase-like (PK-like) 257 551 IPR011009 -
Pral1802g00011 566 Gene3D Transferase(Phosphotransferase) domain 1 355 562 - -
Pral1802g00011 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Pral1802g00011 566 PANTHER OS04G0122200 PROTEIN 7 556 - -
Pral1802g00011 566 SMART serkin_6 279 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1802g00011 566 FunFam Serine-threonine protein kinase plant-type 259 354 - -
Pral1802g00011 566 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Pral1802g00011 566 SUPERFAMILY L domain-like 7 201 - -
Pral1802g00011 566 Gene3D Ribonuclease Inhibitor 6 217 IPR032675 -
Pral1802g00011 566 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 355 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1802g00011 Pral-Chr1802 193302 195298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1802g00011 7 560 Receptor kinase-like Gene Family AT3G47570 40.034 1.58e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral1802g00011 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1802g00011 - K13420 pcin:129285519 854.744