Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1802g00004 ATGCCGTCATTAAAACATATTGGCCTTGGCATCAATCATTTAAAGGGTAATTTGTCTGAAGAAATGTGTAATCAACTCCCTTTACTTGAAGTCTTTAGTGTTGCTGTTAATCAATTAGAGGGAAGCATTCCACAATCAATAAGCAACTGCACATCCTTGAAAGAATTATATTTGGATGGTAACTCATTTACAGGTTTTATACCCAAGGACATAGGCAATCTTGTTAGACTTGAAATCATAGATTTGGGATCAAATTATTTGAGTGGACCTATTCCTTTCAGTATATTCACCATTTCAACATTGAAATGGTTAGAACTTACCGATAATTCCCTCTCTAGCCTTCTCCCATCATATTTAGGGATTGGCCTTCCCAACTTGGAGACCTTATGGCTGGATAGCAATGAACTAAGTGGACAAATTCCAAAAAGCATATCAAATGTTTCCAAGCTCAAAACGTTAGATTTGTCAGTGAATAAATTAAATGGAGCTATACCCAATGTCATTGGAAATTTAAAAAACTTGTTCAACTTAGCTTTGCATGGGAATGATTTGACTGGGTTGATTCCAGACACAATTAGCAACTTACATAACCTTCAACGTTTAAGTCTCAGCAACAACAAATTACAAGGTTCCATTATAAATGAACTTTGCCAACTCAAAAATCTAAGTGAGTTGTATCTTGACAACAACATGTTTTCTGGAGCAATACCAAGATGTCTCGGGAGTCCTTCTTTGCGGAAGTTGAATTTTAGCTTCAACAAATTGATGTCTCATATACCCTTTTCTCTTTGGAGTCTCAAAGATATCTTGGTTTTAGACATATCGTCCAATGCATTGAGTGGATCAATATCACAAGAGTTATCAAACTTTAGAGCAATTATACTATTGAACTTGTCAAGAAATCAACTTTCAGGAAGCATCCCTACAACTATGGGTAGCTTGCAAACCTTGATAACTCTATCTTTGGCTAACAACAAACTACAAGGGTCTATTCCTAAGTCATTTAGTAGCATGATAAGCATAGAATCTATGGATCTTTCCCATAATTATTTATCTGGTATGATTCCAAAGTCCTTAGAGTCATTACTCAATCTTAGATACATTAATTTTTCCTACAATTTGTTGGATGGAGAAATTCCAAGTGGTGGTCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGAAAGTCCCAACTACAAGTCCACCCTTGTAGGAGAGGAAATAAGCACATGTCAAATAAAGTGATGCTGGTGATAAAATGCTCAATGCCTATCATGGTTGTCATTTTGGTTGTTATAGGCGTTCTCTTTCTAAAACATAACAGAGATGATGCTAACTATGCAACCAAAAGGGATTTAACAAATTTGGATGCGGCAGCTAGGATATCCTATTATGAGCTTCTACAGGGAACAAATAGATTTGATGAGAGTAATCTTCTTGGCTTTGGAAGTTTTGGATCAGTATACAAAGCAATTCTTCCAAATAAAAAGATAGTTGCTGTCAAAGTATTTAACATAGACATGGAAGAAGCATTCAGAAGTTTTGATATTGAATGTGTTGCCCTATGCAATTTACGCCACCGGAATCTTATTAAGATTATTAGTTGTTGCTCAAATGATGCTTTCAGGTCTCTAATCATGGAATTCATGTCAAATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCCTTGAAAGGTTGAATATAATGGTTGATGTGGCATCTGCATTAGAGTATCTTCATCATGGTACTTCTACTCCAATTGTTCATTGTGACATAAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATGTTAGTGATTTTGGCATAGCTAAACTATTAGGTGAAGGACAATTGGAAACTTATACTAAAACATTGGCTACAGTTGGCTATATAGCACCAGAGTATGGATCAAAAGGAGCGGTTTCTTTCAAAGGAGATGTATATAGTTATGGTATCATGCTAATGGAGATGTTTACAAGGAAGAAGCCAACCGATGAAATGTTTGTTGAAAGTCTTGGTTTGAAAGATTGGGTTAGCAAATCAACACCACATTCAATCATCAATATTCTAGATGTCAATTTGCTACATGAAGCAAATCCAAATATCAACAATATATTGCCGCATATGTCATCAATTTTTGAGTTGGCATTAAGCTGTTGCACTGAATTACCTGAAGCACGAATTTTGATGAATGATGTTGTGGTCTCATTGAAAAAGATAAGGTCATATTTATGTTCAATGTCAGAGATGCACCACTAG 2304 0.3529 MPSLKHIGLGINHLKGNLSEEMCNQLPLLEVFSVAVNQLEGSIPQSISNCTSLKELYLDGNSFTGFIPKDIGNLVRLEIIDLGSNYLSGPIPFSIFTISTLKWLELTDNSLSSLLPSYLGIGLPNLETLWLDSNELSGQIPKSISNVSKLKTLDLSVNKLNGAIPNVIGNLKNLFNLALHGNDLTGLIPDTISNLHNLQRLSLSNNKLQGSIINELCQLKNLSELYLDNNMFSGAIPRCLGSPSLRKLNFSFNKLMSHIPFSLWSLKDILVLDISSNALSGSISQELSNFRAIILLNLSRNQLSGSIPTTMGSLQTLITLSLANNKLQGSIPKSFSSMISIESMDLSHNYLSGMIPKSLESLLNLRYINFSYNLLDGEIPSGGPFQNFTAQSFMMNKDLCGKSQLQVHPCRRGNKHMSNKVMLVIKCSMPIMVVILVVIGVLFLKHNRDDANYATKRDLTNLDAAARISYYELLQGTNRFDESNLLGFGSFGSVYKAILPNKKIVAVKVFNIDMEEAFRSFDIECVALCNLRHRNLIKIISCCSNDAFRSLIMEFMSNGSLDRWLYSHNYCLDILERLNIMVDVASALEYLHHGTSTPIVHCDIKPSNVLLDEDMVAHVSDFGIAKLLGEGQLETYTKTLATVGYIAPEYGSKGAVSFKGDVYSYGIMLMEMFTRKKPTDEMFVESLGLKDWVSKSTPHSIINILDVNLLHEANPNINNILPHMSSIFELALSCCTELPEARILMNDVVVSLKKIRSYLCSMSEMHH 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1802g00004 767 Gene3D Phosphorylase Kinase; domain 1 444 555 - -
Pral1802g00004 767 Pfam Leucine Rich Repeat 52 74 IPR001611 GO:0005515
Pral1802g00004 767 PANTHER LEUCINE RICH REPEAT KINASE 2 123 756 - -
Pral1802g00004 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Pral1802g00004 767 FunFam Serine-threonine protein kinase plant-type 460 555 - -
Pral1802g00004 767 Gene3D Transferase(Phosphotransferase) domain 1 556 764 - -
Pral1802g00004 767 Pfam Leucine rich repeat 317 375 IPR001611 GO:0005515
Pral1802g00004 767 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Pral1802g00004 767 SUPERFAMILY Protein kinase-like (PK-like) 463 752 IPR011009 -
Pral1802g00004 767 SMART LRR_typ_2 195 218 IPR003591 -
Pral1802g00004 767 SMART LRR_typ_2 123 147 IPR003591 -
Pral1802g00004 767 SMART LRR_typ_2 26 50 IPR003591 -
Pral1802g00004 767 SMART LRR_typ_2 314 337 IPR003591 -
Pral1802g00004 767 SMART LRR_typ_2 338 361 IPR003591 -
Pral1802g00004 767 SMART LRR_typ_2 219 243 IPR003591 -
Pral1802g00004 767 SMART LRR_typ_2 171 194 IPR003591 -
Pral1802g00004 767 PRINTS Leucine-rich repeat signature 195 208 - -
Pral1802g00004 767 PRINTS Leucine-rich repeat signature 150 163 - -
Pral1802g00004 767 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 556 765 - -
Pral1802g00004 767 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 21 115 - -
Pral1802g00004 767 SUPERFAMILY L domain-like 1 185 - -
Pral1802g00004 767 Gene3D Ribonuclease Inhibitor 1 118 IPR032675 -
Pral1802g00004 767 Gene3D Ribonuclease Inhibitor 119 419 IPR032675 -
Pral1802g00004 767 ProSiteProfiles Protein kinase domain profile. 480 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1802g00004 767 SUPERFAMILY L domain-like 148 402 - -
Pral1802g00004 767 ProSitePatterns Protein kinases ATP-binding region signature. 486 508 IPR017441 GO:0005524
Pral1802g00004 767 SMART serkin_6 480 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1802g00004 767 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 158 414 - -
Pral1802g00004 767 Pfam Protein kinase domain 481 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1802g00004 767 SMART LRR_sd22_2 195 224 - -
Pral1802g00004 767 SMART LRR_sd22_2 266 289 - -
Pral1802g00004 767 SMART LRR_sd22_2 123 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1802g00004 Pral-Chr1802 71311 87850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1802g00004 1 764 Receptor kinase-like Gene Family AT3G47570 39.147 1.06e-155 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral1802g00004 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1802g00004 - K13420 pcin:129285519 1130.16