Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral179g00002 ATGGGCTGTTTCTCGTGTTTCGATTCGAAGGAGGATGAGCAGCTCAATCCTCGGCAAGAAATTGATGATCTTAAGCAAGGCCATCCAGCTGCTTCCTCTCACATTTCCAGATTGCCCTCTGGAGCGGACAAGCTTCGCTCAAGGAGTAGTAATGGAGGATCCAAAAGGGAACTTCCCGCTCCTAAGGATGGGCCTGGCGTCCAAATTGCTGCCCAGACTTTCACTTTCCGTGAGCTTGCAGCTGCAACTAAAAATTTTAGGCCAGAATCCTTTATAGGGGAAGGTGGCTTTGGAAGAGTGTACAAAGGGCGTCTAGAAAGCACGGGTCAGGTTGTTGCTGTTAAACAGTTAGATAGAAATGGCCTCCAGGGTAATCGCGAATTCCTAGTGGAGGTTCTCATGCTTAGTCTTCTACACCATCCTAACCTTGTCAATCTTATTGGTTACTGTGCTGATGGGGACCAACGTCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCATGTTACAGCTCATAGGCAGGATCATTTTTAG 549 0.4699 MGCFSCFDSKEDEQLNPRQEIDDLKQGHPAASSHISRLPSGADKLRSRSSNGGSKRELPAPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHVTAHRQDHF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral179g00002 182 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Pral179g00002 182 ProSiteProfiles Protein kinase domain profile. 86 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral179g00002 182 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Pral179g00002 182 FunFam Serine/threonine-protein kinase PBS1 60 162 - -
Pral179g00002 182 PANTHER OS07G0668900 PROTEIN 3 176 - -
Pral179g00002 182 MobiDBLite consensus disorder prediction 1 66 - -
Pral179g00002 182 MobiDBLite consensus disorder prediction 11 27 - -
Pral179g00002 182 Pfam Protein tyrosine and serine/threonine kinase 91 175 IPR001245 GO:0004672|GO:0006468
Pral179g00002 182 SUPERFAMILY Protein kinase-like (PK-like) 67 176 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral179g00002 Pral-Chr179 1044 4123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral179g00002 1 172 Glycoside Hydrolase AT3G07070 58.382 1.35e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral179g00002 PK_Tyr_Ser-Thr 3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral179g00002 K13430 - tcc:18608901 308.145