Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral179g00001 ATGGGCTGTTTCTCGTGTTTCGATTCGAAGGAGGATGAGCAGCTCAATCCTCGGCAAGAAATTGATGATCTTAAGCAAGGCCATCCAGCTGCTTCCTCTCACATTTCCAGATTGCCCTCTGGAGCGGACAAGCTTCGCTCAAGGAGTAGTAATGGAGGATCCAAAAGGGAACTTCCCGCTCCTAAGGATGGGCCTGGCGTCCAAATTGCTGCCCAGACTTTCACTTTCCGTGAGCTTGCAGCTGCAACTAAAAATTTTAGGCCAGAATCCTTTATAGGGGAAGGTGGCTTTGGAAGAGTGTACAAAGGGCGTCTAGAAAGCACGGGTCAGGTTGTTGCTGTTAAACAGTTAGATAGAAATGGCCTCCAGGGTAATCGCGAATTCCTAGTGGAGGTTCTCATGCTTAGTCTTCTACACCATCCTAACCTTGTCAATCTTATTGGTTACTGTGCTGATGGGGACCAACGTCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCATGCTCATAGGCAGGATCATTTTTAG 543 0.4715 MGCFSCFDSKEDEQLNPRQEIDDLKQGHPAASSHISRLPSGADKLRSRSSNGGSKRELPAPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHAHRQDHF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral179g00001 180 FunFam Serine/threonine-protein kinase PBS1 60 162 - -
Pral179g00001 180 PANTHER OS07G0668900 PROTEIN 3 177 - -
Pral179g00001 180 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Pral179g00001 180 SUPERFAMILY Protein kinase-like (PK-like) 67 177 IPR011009 -
Pral179g00001 180 MobiDBLite consensus disorder prediction 1 66 - -
Pral179g00001 180 MobiDBLite consensus disorder prediction 11 27 - -
Pral179g00001 180 Pfam Protein tyrosine and serine/threonine kinase 91 177 IPR001245 GO:0004672|GO:0006468
Pral179g00001 180 ProSiteProfiles Protein kinase domain profile. 86 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral179g00001 180 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral179g00001 Pral-Chr179 1044 4123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral179g00001 1 172 Glycoside Hydrolase AT3G07070 58.382 1.35e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral179g00001 PK_Tyr_Ser-Thr 5.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral179g00001 K13430 - tcc:18608901 308.145