Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1795g00001 ATGGCCAATAACCCATCCGAGGCTTCCACCGACGACTTCTTCGAACAAATCCTTGGGCTCCCAACCTTCGCTTCCATTGACTCCGGCCTGGCTGGAGCTGATGGCGGCTTGGCCGGTACGGCTTCTCCGGCTCCTAAGATGCTGCAGCTCAACTCCAGCGATGCCACCGGCCACCCCTCCGCCGTCGGTGCTGCTGGCGGTACTGGTTTTCATGGACCAGTATACCAGTTAGGCCTCAGTTTGGAGCAAGGAAAAGGAGGAAGTTATTTTAAACCCGAGGAGGCTTCGGGCAGTGGGAAGCGCTTTCGCGATGACATCGTTGATGGTAGAACTAAGAATGTTTTTCATGGGCAGTCTATGCCATCTAGCATTCCTGCTGCTCCACAGCCACCAACAATGCGACCAAGGGTGCGGGCTAGAAGAGGACAGGCCACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCGGAAAGAATTAGGGCCTTGCAGGAACTGGTTCCTAGTGTTAATAAGACAGATAGAGCTGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGACTTCAAGTGAAGGTTTTGAGTATGAGTAGATTAGGTGGAGCCGGTGCAGTTGCACCACTGGTGACTGACATCCCATTATCATCAGTTGAGGAAGATGGAAGTGAAGGTGGAAGAAATGAAGCAGTGTGGGAGAAGTGGTCAAATGATGGCACGGAAAGACAAGTAGCTAAGCTTATGGAGGAAAATGTTGGAGCTGCCATGCAATTCCTTCAATCGAAGGCTCTCTGCATAATGCCGATCTCACTCGCGTCTGCAATATACCACTCGCAGCCACCAGACACCTCAAGCATAGTTAAGTCTGAGACTAATCCTCCTCCATAG 900 0.5067 MANNPSEASTDDFFEQILGLPTFASIDSGLAGADGGLAGTASPAPKMLQLNSSDATGHPSAVGAAGGTGFHGPVYQLGLSLEQGKGGSYFKPEEASGSGKRFRDDIVDGRTKNVFHGQSMPSSIPAAPQPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEDGSEGGRNEAVWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQPPDTSSIVKSETNPPP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1795g00001 299 SMART finulus 149 198 IPR011598 GO:0046983
Pral1795g00001 299 FunFam Basic helix-loop-helix transcription factor 138 200 - -
Pral1795g00001 299 Pfam Helix-loop-helix DNA-binding domain 148 192 IPR011598 GO:0046983
Pral1795g00001 299 Gene3D - 138 200 IPR036638 GO:0046983
Pral1795g00001 299 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 86 278 - -
Pral1795g00001 299 MobiDBLite consensus disorder prediction 114 147 - -
Pral1795g00001 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
Pral1795g00001 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 202 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1795g00001 Pral-Chr1795 11672 15247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1795g00001 70 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.298 4.28e-118 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral1795g00001 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1795g00001 - - pcin:129304759 551.206